Last updated on 2022-03-31 06:00:12 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.3 | 21.47 | 397.95 | 419.42 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.3 | 17.62 | 291.91 | 309.53 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.3 | 528.08 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.3 | 508.13 | NOTE | |||
| r-devel-windows-x86_64-new-UL | 1.1.3 | 43.00 | 660.00 | 703.00 | OK | |
| r-patched-linux-x86_64 | 1.1.3 | 23.87 | 381.15 | 405.02 | OK | |
| r-release-linux-x86_64 | 1.1.3 | 20.73 | 359.78 | 380.51 | OK | |
| r-release-macos-arm64 | 1.1.3 | NOTE | ||||
| r-release-macos-x86_64 | 1.1.3 | ERROR | ||||
| r-release-windows-ix86+x86_64 | 1.1.3 | 48.00 | 508.00 | 556.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.3 | NOTE | ||||
| r-oldrel-windows-ix86+x86_64 | 1.1.3 | 49.00 | 504.00 | 553.00 | OK |
Version: 1.1.3
Check: dependencies in R code
Result: NOTE
Namespaces in Imports field not imported from:
‘GenomicAlignments’ ‘R.utils’ ‘data.table’ ‘magrittr’ ‘tidyr’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-x86_64
Version: 1.1.3
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘BSgenome.Mmusculus.UCSC.mm10’
Flavors: r-release-macos-arm64, r-oldrel-macos-x86_64
Version: 1.1.3
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking:
'BSgenome.Hsapiens.UCSC.hg38', 'BSgenome.Hsapiens.UCSC.hg19',
'BSgenome.Mmusculus.UCSC.mm10'
Flavor: r-release-macos-x86_64
Version: 1.1.3
Check: examples
Result: ERROR
Running examples in ‘MicroSEC-Ex.R’ failed
The error most likely occurred in:
> ### Name: fun_load_genome
> ### Title: Genome loading function.
> ### Aliases: fun_load_genome
>
> ### ** Examples
>
> fun_load_genome("Human")
Error: Install BSgenome.Hsapiens.UCSC.hg38 package.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.3
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘my-vignette.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
Quitting from lines 118-178 (my-vignette.Rmd)
Error: processing vignette 'my-vignette.Rmd' failed with diagnostics:
Install BSgenome.Hsapiens.UCSC.hg38 package.
--- failed re-building ‘my-vignette.Rmd’
SUMMARY: processing the following file failed:
‘my-vignette.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-macos-x86_64