CRAN Package Check Results for Package BigDataStatMeth

Last updated on 2022-04-19 15:52:25 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.99.32 633.15 712.94 1346.09 NOTE
r-devel-linux-x86_64-debian-gcc 0.99.32 515.31 0.02 515.33 FAIL
r-devel-linux-x86_64-fedora-clang 0.99.32 1831.91 NOTE
r-devel-linux-x86_64-fedora-gcc 0.99.32 1666.77 NOTE
r-devel-windows-x86_64-new-UL 0.99.32 597.00 506.00 1103.00 NOTE
r-patched-linux-x86_64 0.99.32 557.72 1322.27 1879.99 NOTE
r-release-linux-x86_64 0.99.32 574.83 1354.75 1929.58 NOTE
r-release-macos-arm64 0.99.32 NOTE
r-release-macos-x86_64 0.99.32 WARN
r-release-windows-ix86+x86_64 0.99.32 1541.00 0.00 1541.00 FAIL
r-oldrel-macos-x86_64 0.99.32 WARN
r-oldrel-windows-ix86+x86_64 0.99.32 1544.00 583.00 2127.00 WARN

Additional issues

ATLAS

Check Details

Version: 0.99.32
Check: for GNU extensions in Makefiles
Result: NOTE
    GNU make is a SystemRequirements.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64-new-UL, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.99.32
Check: re-building of vignette outputs
Result: FAIL
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.99.32
Check: installed package size
Result: NOTE
     installed size is 57.9Mb
     sub-directories of 1Mb or more:
     doc 2.2Mb
     libs 55.4Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64-new-UL, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.99.32
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘BigDataStatMeth_hdf5.Rmd’ using rmarkdown
    Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed.
    Quitting from lines 2-32 (BigDataStatMeth_hdf5.Rmd)
    Error: processing vignette 'BigDataStatMeth_hdf5.Rmd' failed with diagnostics:
    could not find function "pkg_ver"
    --- failed re-building ‘BigDataStatMeth_hdf5.Rmd’
    
    --- re-building ‘BigDataStatMeth_memory.Rmd’ using rmarkdown
    Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed.
    Quitting from lines 2-32 (BigDataStatMeth_memory.Rmd)
    Error: processing vignette 'BigDataStatMeth_memory.Rmd' failed with diagnostics:
    could not find function "pkg_ver"
    --- failed re-building ‘BigDataStatMeth_memory.Rmd’
    
    SUMMARY: processing the following files failed:
     ‘BigDataStatMeth_hdf5.Rmd’ ‘BigDataStatMeth_memory.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64

Version: 0.99.32
Check: re-building of vignette outputs
Result: FAIL
    Check process probably crashed or hung up for 20 minutes ... killed
    Most likely this happened in the example checks (?),
    if not, ignore the following last lines of example output:
    
    ======== End of example output (where/before crash/hang up occured ?) ========
Flavor: r-release-windows-ix86+x86_64

Version: 0.99.32
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building 'BigDataStatMeth_hdf5.Rmd' using rmarkdown
    Warning: stack imbalance in '<-', 57 then 59
    Warning: stack imbalance in 'withVisible', 50 then 52
    Warning: stack imbalance in '<-', 57 then 59
    Warning: stack imbalance in 'withVisible', 50 then 52
    --- re-building 'BigDataStatMeth_memory.Rmd' using rmarkdown
    Loading required package: stats4
    Loading required package: BiocGenerics
    Loading required package: parallel
    
    Attaching package: 'BiocGenerics'
    
    The following objects are masked from 'package:parallel':
    
     clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
     clusterExport, clusterMap, parApply, parCapply, parLapply,
     parLapplyLB, parRapply, parSapply, parSapplyLB
    
    The following objects are masked from 'package:stats':
    
     IQR, mad, sd, var, xtabs
    
    The following objects are masked from 'package:base':
    
     Filter, Find, Map, Position, Reduce, anyDuplicated, append,
     as.data.frame, basename, cbind, colnames, dirname, do.call,
     duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
     lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
     pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
     tapply, union, unique, unsplit, which.max, which.min
    
    Loading required package: MatrixGenerics
    Loading required package: matrixStats
    
    Attaching package: 'MatrixGenerics'
    
    The following objects are masked from 'package:matrixStats':
    
     colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse,
     colCounts, colCummaxs, colCummins, colCumprods, colCumsums,
     colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs,
     colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats,
     colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds,
     colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads,
     colWeightedMeans, colWeightedMedians, colWeightedSds,
     colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet,
     rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods,
     rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps,
     rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins,
     rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks,
     rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars,
     rowWeightedMads, rowWeightedMeans, rowWeightedMedians,
     rowWeightedSds, rowWeightedVars
    
    Loading required package: S4Vectors
    
    Attaching package: 'S4Vectors'
    
    The following object is masked from 'package:Matrix':
    
     expand
    
    The following object is masked from 'package:base':
    
     expand.grid
    
    Loading required package: IRanges
    
    Attaching package: 'IRanges'
    
    The following object is masked from 'package:grDevices':
    
     windows
    
    
    Attaching package: 'DelayedArray'
    
    The following objects are masked from 'package:base':
    
     aperm, apply, rowsum
    
    Coordinate system already present. Adding new coordinate system, which will replace the existing one.
    Coordinate system already present. Adding new coordinate system, which will replace the existing one.
    Coordinate system already present. Adding new coordinate system, which will replace the existing one.
    Coordinate system already present. Adding new coordinate system, which will replace the existing one.
    --- finished re-building 'BigDataStatMeth_memory.Rmd'
    
    SUMMARY: processing the following file failed:
     'BigDataStatMeth_hdf5.Rmd'
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-oldrel-windows-ix86+x86_64