Last updated on 2022-04-27 11:53:52 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0 | 8.13 | 79.45 | 87.58 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 1.0 | 6.53 | 60.55 | 67.08 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 1.0 | 104.47 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0 | 98.54 | ERROR | |||
| r-devel-windows-x86_64 | 1.0 | 59.00 | 92.00 | 151.00 | NOTE | |
| r-patched-linux-x86_64 | 1.0 | 9.84 | 77.34 | 87.18 | NOTE | |
| r-release-linux-x86_64 | 1.0 | 6.05 | 75.76 | 81.81 | NOTE | |
| r-release-macos-arm64 | 1.0 | 32.00 | NOTE | |||
| r-release-macos-x86_64 | 1.0 | 55.00 | NOTE | |||
| r-release-windows-x86_64 | 1.0 | 32.00 | 94.00 | 126.00 | NOTE | |
| r-oldrel-macos-arm64 | 1.0 | 38.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 1.0 | 59.00 | NOTE | |||
| r-oldrel-windows-ix86+x86_64 | 1.0 | 17.00 | 86.00 | 103.00 | NOTE |
Version: 1.0
Check: R code for possible problems
Result: NOTE
RValues: no visible global function definition for 'cor.test'
commcorrelogram: no visible global function definition for 'p.adjust'
lag.sort: no visible global function definition for 'combn'
lagSelect: no visible global function definition for 'dev.new'
lagSelect: no visible global function definition for 'par'
mod.commcorrelogram: no visible global function definition for
'na.omit'
mod.commcorrelogram: no visible global function definition for 'nlminb'
mod.commcorrelogram: no visible global function definition for
'uniroot'
mod.commcorrelogram: no visible global function definition for 'par'
mod.commcorrelogram: no visible global function definition for 'abline'
mod.commcorrelogram: no visible global function definition for 'lines'
mod.commcorrelogram: no visible global function definition for 'legend'
plot.commcorrelogram: no visible global function definition for
'na.omit'
plot.commcorrelogram: no visible global function definition for 'par'
plot.commcorrelogram: no visible global function definition for
'abline'
plot.commcorrelogram: no visible global function definition for
'legend'
mod,commcorrelogram: no visible global function definition for
'na.omit'
mod,commcorrelogram: no visible global function definition for 'nlminb'
mod,commcorrelogram: no visible global function definition for
'uniroot'
mod,commcorrelogram: no visible global function definition for 'par'
mod,commcorrelogram: no visible global function definition for 'abline'
mod,commcorrelogram: no visible global function definition for 'lines'
mod,commcorrelogram: no visible global function definition for 'legend'
plot,commcorrelogram-missing: no visible global function definition for
'na.omit'
plot,commcorrelogram-missing: no visible global function definition for
'par'
plot,commcorrelogram-missing: no visible global function definition for
'abline'
plot,commcorrelogram-missing: no visible global function definition for
'legend'
Undefined global functions or variables:
abline combn cor.test dev.new legend lines na.omit nlminb p.adjust
par uniroot
Consider adding
importFrom("grDevices", "dev.new")
importFrom("graphics", "abline", "legend", "lines", "par")
importFrom("stats", "cor.test", "na.omit", "nlminb", "p.adjust",
"uniroot")
importFrom("utils", "combn")
to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64
Version: 1.0
Check: examples
Result: ERROR
Running examples in ‘CommunityCorrelogram-Ex.R’ failed
The error most likely occurred in:
> ### Name: commcorrelogram
> ### Title: Community Correlogram
> ### Aliases: commcorrelogram
> ### Keywords: multivariate spatial chron
>
> ### ** Examples
>
> #spatial community ANOSIM correlogram
> data(mite)
> data(mite.xy)
> commcorrelogram(sampleData=mite,sampleLocation=cbind(mite.xy,z=0)
+ ,lagSize=0.3,lagNumber=17,lagTol=0.15,option=1,numTests=5)
Error in abs(object@community.correlogram[, 3]) <= 1 && object@community.correlogram[, :
'length = 18' in coercion to 'logical(1)'
Calls: commcorrelogram ... validObject -> anyStrings -> isTRUE -> validityMethod
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc