Last updated on 2022-05-10 10:49:36 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 4.2 | 14.48 | 98.58 | 113.06 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 4.2 | 12.79 | 75.60 | 88.39 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 4.2 | 135.20 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 4.2 | 138.35 | NOTE | |||
| r-devel-windows-x86_64 | 4.2 | 32.00 | 116.00 | 148.00 | NOTE | |
| r-patched-linux-x86_64 | 4.2 | 20.16 | 93.32 | 113.48 | NOTE | |
| r-release-linux-x86_64 | 4.2 | 12.96 | 94.68 | 107.64 | NOTE | |
| r-release-macos-arm64 | 4.2 | 43.00 | NOTE | |||
| r-release-macos-x86_64 | 4.2 | 66.00 | NOTE | |||
| r-release-windows-x86_64 | 4.2 | 32.00 | 115.00 | 147.00 | NOTE | |
| r-oldrel-macos-arm64 | 4.2 | 51.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 4.2 | 77.00 | NOTE | |||
| r-oldrel-windows-ix86+x86_64 | 4.2 | 33.00 | 133.00 | 166.00 | NOTE |
Version: 4.2
Check: package dependencies
Result: NOTE
Depends: includes the non-default packages:
'hdrcde', 'coda', 'MASS', 'bayesm', 'mnormt', 'spatstat'
Adding so many packages to the search path is excessive and importing
selectively is preferable.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64
Version: 4.2
Check: DESCRIPTION meta-information
Result: NOTE
Malformed Description field: should contain one or more complete sentences.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64
Version: 4.2
Check: dependencies in R code
Result: NOTE
Packages in Depends field not imported from:
'MASS' 'bayesm' 'coda' 'hdrcde' 'mnormt' 'spatstat'
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64
Version: 4.2
Check: R code for possible problems
Result: NOTE
Found an obsolete/platform-specific call in the following function:
'newgraphwindow'
Found the platform-specific devices:
'quartz' 'windows' 'x11'
dev.new() is the preferred way to open a new device, in the unlikely
event one is needed.
bayesMVN: no visible global function definition for 'rmultireg'
bayestwoNorm: no visible global function definition for 'runireg'
convexhull: no visible global function definition for 'chull'
laymanmetrics: no visible global function definition for 'sd'
newgraphwindow: no visible global function definition for 'quartz'
newgraphwindow: no visible global function definition for 'x11'
overlap: no visible global function definition for 'overlap.xypolygon'
panelcontour: no visible global function definition for 'par'
panelcontour: no visible global function definition for 'kde2d'
panelcontour: no visible global function definition for 'contour'
panelcor: no visible global function definition for 'par'
panelcor: no visible global function definition for 'cor'
panelcor: no visible global function definition for 'strwidth'
panelcor: no visible global function definition for 'text'
panelhist: no visible global function definition for 'par'
panelhist: no visible global function definition for 'hist'
panelhist: no visible global function definition for 'rect'
plotSigmaEllipse: no visible global function definition for 'cov2cor'
plotSigmaEllipse: no visible global function definition for 'lines'
popSEA: no visible global function definition for 'cov2cor'
siaraddcross: no visible global function definition for 'points'
siaraddcross: no visible global function definition for 'lines'
siardensityplot: no visible global function definition for 'gray'
siardensityplot: no visible global function definition for 'axis'
siardensityplot: no visible global function definition for 'hdr'
siardensityplot: no visible global function definition for 'bw.nrd0'
siardensityplot: no visible global function definition for 'median'
siardensityplot: no visible global function definition for 'polygon'
siardensityplot: no visible global function definition for 'points'
siarelicit: no visible global function definition for 'menu'
siarhdrs: no visible global function definition for 'hdr'
siarhdrs: no visible global function definition for 'bw.nrd0'
siarhdrs: no visible global function definition for 'geweke.diag'
siarhdrs: no visible global function definition for 'pnorm'
siarhistograms: no visible global function definition for 'menu'
siarhistograms: no visible global function definition for 'hist'
siarhistograms: no visible global function definition for 'mtext'
siarhistograms: no visible global function definition for 'lines'
siarhistograms: no visible global function definition for 'legend'
siarhistograms: no visible global function definition for
'devAskNewPage'
siarloaddata: no visible global function definition for 'menu'
siarloaddata: no visible global function definition for 'read.table'
siarmatrixplot: no visible global function definition for 'pairs'
siarmatrixplot: no visible global function definition for 'mtext'
siarmenu: no visible global function definition for 'menu'
siarmultigrouprun: no visible global function definition for 'menu'
siarplotdatawrapper: no visible global function definition for
'split.screen'
siarplotdatawrapper: no visible global function definition for 'screen'
siarplotdatawrapper: no visible global function definition for
'close.screen'
siarplotdatawrapper: no visible global function definition for 'mtext'
siarplotdatawrapper: no visible global function definition for 'legend'
siarproportionbygroupplot: no visible global function definition for
'gray'
siarproportionbygroupplot: no visible global function definition for
'menu'
siarproportionbygroupplot: no visible global function definition for
'axis'
siarproportionbygroupplot: no visible global function definition for
'mtext'
siarproportionbygroupplot: no visible global function definition for
'hdr'
siarproportionbygroupplot: no visible global function definition for
'bw.nrd0'
siarproportionbygroupplot: no visible global function definition for
'polygon'
siarproportionbygroupplot: no visible global function definition for
'lines'
siarproportionbygroupplot: no visible global function definition for
'legend'
siarproportionbygroupplot: no visible global function definition for
'strwidth'
siarproportionbysourceplot: no visible global function definition for
'gray'
siarproportionbysourceplot: no visible global function definition for
'menu'
siarproportionbysourceplot: no visible global function definition for
'axis'
siarproportionbysourceplot: no visible global function definition for
'mtext'
siarproportionbysourceplot: no visible global function definition for
'hdr'
siarproportionbysourceplot: no visible global function definition for
'bw.nrd0'
siarproportionbysourceplot: no visible global function definition for
'polygon'
siarproportionbysourceplot: no visible global function definition for
'lines'
siarproportionbysourceplot: no visible global function definition for
'legend'
siarproportionbysourceplot: no visible global function definition for
'strwidth'
siarsinglegrouprun: no visible global function definition for 'menu'
siarsolomultigrouprun: no visible global function definition for 'menu'
siarsolosinglegrouprun: no visible global function definition for
'menu'
standard.ellipse: no visible global function definition for 'cov'
standard.ellipse: no visible global function definition for 'qf'
Undefined global functions or variables:
axis bw.nrd0 chull close.screen contour cor cov cov2cor devAskNewPage
geweke.diag gray hdr hist kde2d legend lines median menu mtext
overlap.xypolygon pairs par pnorm points polygon qf quartz read.table
rect rmultireg runireg screen sd split.screen strwidth text x11
Consider adding
importFrom("grDevices", "chull", "devAskNewPage", "gray", "quartz",
"x11")
importFrom("graphics", "axis", "close.screen", "contour", "hist",
"legend", "lines", "mtext", "pairs", "par", "points",
"polygon", "rect", "screen", "split.screen", "strwidth",
"text")
importFrom("stats", "bw.nrd0", "cor", "cov", "cov2cor", "median",
"pnorm", "qf", "sd")
importFrom("utils", "menu", "read.table")
to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 4.2
Check: Rd line widths
Result: NOTE
Rd file 'siarmcmcdirichletv4.Rd':
\usage lines wider than 90 characters:
siarmcmcdirichletv4(data, sources, corrections = 0, concdep = 0, iterations=200000, burnin=50000, howmany=10000, thinby=15, prior = rep ... [TRUNCATED]
Rd file 'siarplotdata.Rd':
\usage lines wider than 90 characters:
siarplotdata(siardata, siarversion = 0, grp=1:siardata$numgroups,panel=NULL,isos=c(0,0),leg=1)
Rd file 'siarproportionbygroupplot.Rd':
\usage lines wider than 90 characters:
siarproportionbygroupplot(siardata, siarversion=0,probs=c(95,75,50),xlabels=NULL, grp=NULL, type="boxes",clr=gray((9:1)/10),scl=1,xspc= ... [TRUNCATED]
Rd file 'siarproportionbysourceplot.Rd':
\usage lines wider than 90 characters:
siarproportionbysourceplot(siardata, siarversion=0,probs=c(95,75,50),xlabels=NULL, grp=NULL, type="boxes",clr=gray((9:1)/10),scl=1,xspc ... [TRUNCATED]
Rd file 'siarsolomcmcv4.Rd':
\usage lines wider than 90 characters:
siarsolomcmcv4(data, sources, corrections = 0, concdep = 0, iterations=200000, burnin=50000, howmany=10000, thinby=15, prior = rep(1, n ... [TRUNCATED]
These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 4.2
Check: compiled code
Result: NOTE
File ‘siar/libs/siar.so’:
Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
It is good practice to register native routines and to disable symbol
search.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 4.2
Check: R code for possible problems
Result: NOTE
bayesMVN: no visible global function definition for 'rmultireg'
bayestwoNorm: no visible global function definition for 'runireg'
convexhull: no visible global function definition for 'chull'
laymanmetrics: no visible global function definition for 'sd'
newgraphwindow: no visible global function definition for 'windows'
newgraphwindow: no visible global function definition for 'x11'
overlap: no visible global function definition for 'overlap.xypolygon'
panelcontour: no visible global function definition for 'par'
panelcontour: no visible global function definition for 'kde2d'
panelcontour: no visible global function definition for 'contour'
panelcor: no visible global function definition for 'par'
panelcor: no visible global function definition for 'cor'
panelcor: no visible global function definition for 'strwidth'
panelcor: no visible global function definition for 'text'
panelhist: no visible global function definition for 'par'
panelhist: no visible global function definition for 'hist'
panelhist: no visible global function definition for 'rect'
plotSigmaEllipse: no visible global function definition for 'cov2cor'
plotSigmaEllipse: no visible global function definition for 'lines'
popSEA: no visible global function definition for 'cov2cor'
siaraddcross: no visible global function definition for 'points'
siaraddcross: no visible global function definition for 'lines'
siardensityplot: no visible global function definition for 'gray'
siardensityplot: no visible global function definition for 'axis'
siardensityplot: no visible global function definition for 'hdr'
siardensityplot: no visible global function definition for 'bw.nrd0'
siardensityplot: no visible global function definition for 'median'
siardensityplot: no visible global function definition for 'polygon'
siardensityplot: no visible global function definition for 'points'
siarelicit: no visible global function definition for 'menu'
siarhdrs: no visible global function definition for 'hdr'
siarhdrs: no visible global function definition for 'bw.nrd0'
siarhdrs: no visible global function definition for 'geweke.diag'
siarhdrs: no visible global function definition for 'pnorm'
siarhistograms: no visible global function definition for 'menu'
siarhistograms: no visible global function definition for 'hist'
siarhistograms: no visible global function definition for 'mtext'
siarhistograms: no visible global function definition for 'lines'
siarhistograms: no visible global function definition for 'legend'
siarhistograms: no visible global function definition for
'devAskNewPage'
siarloaddata: no visible global function definition for 'menu'
siarloaddata: no visible global function definition for 'read.table'
siarmatrixplot: no visible global function definition for 'pairs'
siarmatrixplot: no visible global function definition for 'mtext'
siarmenu: no visible global function definition for 'menu'
siarmultigrouprun: no visible global function definition for 'menu'
siarplotdatawrapper: no visible global function definition for
'split.screen'
siarplotdatawrapper: no visible global function definition for 'screen'
siarplotdatawrapper: no visible global function definition for
'close.screen'
siarplotdatawrapper: no visible global function definition for 'mtext'
siarplotdatawrapper: no visible global function definition for 'legend'
siarproportionbygroupplot: no visible global function definition for
'gray'
siarproportionbygroupplot: no visible global function definition for
'menu'
siarproportionbygroupplot: no visible global function definition for
'axis'
siarproportionbygroupplot: no visible global function definition for
'mtext'
siarproportionbygroupplot: no visible global function definition for
'hdr'
siarproportionbygroupplot: no visible global function definition for
'bw.nrd0'
siarproportionbygroupplot: no visible global function definition for
'polygon'
siarproportionbygroupplot: no visible global function definition for
'lines'
siarproportionbygroupplot: no visible global function definition for
'legend'
siarproportionbygroupplot: no visible global function definition for
'strwidth'
siarproportionbysourceplot: no visible global function definition for
'gray'
siarproportionbysourceplot: no visible global function definition for
'menu'
siarproportionbysourceplot: no visible global function definition for
'axis'
siarproportionbysourceplot: no visible global function definition for
'mtext'
siarproportionbysourceplot: no visible global function definition for
'hdr'
siarproportionbysourceplot: no visible global function definition for
'bw.nrd0'
siarproportionbysourceplot: no visible global function definition for
'polygon'
siarproportionbysourceplot: no visible global function definition for
'lines'
siarproportionbysourceplot: no visible global function definition for
'legend'
siarproportionbysourceplot: no visible global function definition for
'strwidth'
siarsinglegrouprun: no visible global function definition for 'menu'
siarsolomultigrouprun: no visible global function definition for 'menu'
siarsolosinglegrouprun: no visible global function definition for
'menu'
standard.ellipse: no visible global function definition for 'cov'
standard.ellipse: no visible global function definition for 'qf'
Undefined global functions or variables:
axis bw.nrd0 chull close.screen contour cor cov cov2cor devAskNewPage
geweke.diag gray hdr hist kde2d legend lines median menu mtext
overlap.xypolygon pairs par pnorm points polygon qf read.table rect
rmultireg runireg screen sd split.screen strwidth text windows x11
Consider adding
importFrom("grDevices", "chull", "devAskNewPage", "gray", "windows",
"x11")
importFrom("graphics", "axis", "close.screen", "contour", "hist",
"legend", "lines", "mtext", "pairs", "par", "points",
"polygon", "rect", "screen", "split.screen", "strwidth",
"text")
importFrom("stats", "bw.nrd0", "cor", "cov", "cov2cor", "median",
"pnorm", "qf", "sd")
importFrom("utils", "menu", "read.table")
to your NAMESPACE file.
Flavors: r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-ix86+x86_64
Version: 4.2
Check: R code for possible problems
Result: NOTE
bayesMVN: no visible global function definition for ‘rmultireg’
bayestwoNorm: no visible global function definition for ‘runireg’
convexhull: no visible global function definition for ‘chull’
laymanmetrics: no visible global function definition for ‘sd’
newgraphwindow: no visible global function definition for ‘quartz’
newgraphwindow: no visible global function definition for ‘x11’
overlap: no visible global function definition for ‘overlap.xypolygon’
panelcontour: no visible global function definition for ‘par’
panelcontour: no visible global function definition for ‘kde2d’
panelcontour: no visible global function definition for ‘contour’
panelcor: no visible global function definition for ‘par’
panelcor: no visible global function definition for ‘cor’
panelcor: no visible global function definition for ‘strwidth’
panelcor: no visible global function definition for ‘text’
panelhist: no visible global function definition for ‘par’
panelhist: no visible global function definition for ‘hist’
panelhist: no visible global function definition for ‘rect’
plotSigmaEllipse: no visible global function definition for ‘cov2cor’
plotSigmaEllipse: no visible global function definition for ‘lines’
popSEA: no visible global function definition for ‘cov2cor’
siaraddcross: no visible global function definition for ‘points’
siaraddcross: no visible global function definition for ‘lines’
siardensityplot: no visible global function definition for ‘gray’
siardensityplot: no visible global function definition for ‘axis’
siardensityplot: no visible global function definition for ‘hdr’
siardensityplot: no visible global function definition for ‘bw.nrd0’
siardensityplot: no visible global function definition for ‘median’
siardensityplot: no visible global function definition for ‘polygon’
siardensityplot: no visible global function definition for ‘points’
siarelicit: no visible global function definition for ‘menu’
siarhdrs: no visible global function definition for ‘hdr’
siarhdrs: no visible global function definition for ‘bw.nrd0’
siarhdrs: no visible global function definition for ‘geweke.diag’
siarhdrs: no visible global function definition for ‘pnorm’
siarhistograms: no visible global function definition for ‘menu’
siarhistograms: no visible global function definition for ‘hist’
siarhistograms: no visible global function definition for ‘mtext’
siarhistograms: no visible global function definition for ‘lines’
siarhistograms: no visible global function definition for ‘legend’
siarhistograms: no visible global function definition for
‘devAskNewPage’
siarloaddata: no visible global function definition for ‘menu’
siarloaddata: no visible global function definition for ‘read.table’
siarmatrixplot: no visible global function definition for ‘pairs’
siarmatrixplot: no visible global function definition for ‘mtext’
siarmenu: no visible global function definition for ‘menu’
siarmultigrouprun: no visible global function definition for ‘menu’
siarplotdatawrapper: no visible global function definition for
‘split.screen’
siarplotdatawrapper: no visible global function definition for ‘screen’
siarplotdatawrapper: no visible global function definition for
‘close.screen’
siarplotdatawrapper: no visible global function definition for ‘mtext’
siarplotdatawrapper: no visible global function definition for ‘legend’
siarproportionbygroupplot: no visible global function definition for
‘gray’
siarproportionbygroupplot: no visible global function definition for
‘menu’
siarproportionbygroupplot: no visible global function definition for
‘axis’
siarproportionbygroupplot: no visible global function definition for
‘mtext’
siarproportionbygroupplot: no visible global function definition for
‘hdr’
siarproportionbygroupplot: no visible global function definition for
‘bw.nrd0’
siarproportionbygroupplot: no visible global function definition for
‘polygon’
siarproportionbygroupplot: no visible global function definition for
‘lines’
siarproportionbygroupplot: no visible global function definition for
‘legend’
siarproportionbygroupplot: no visible global function definition for
‘strwidth’
siarproportionbysourceplot: no visible global function definition for
‘gray’
siarproportionbysourceplot: no visible global function definition for
‘menu’
siarproportionbysourceplot: no visible global function definition for
‘axis’
siarproportionbysourceplot: no visible global function definition for
‘mtext’
siarproportionbysourceplot: no visible global function definition for
‘hdr’
siarproportionbysourceplot: no visible global function definition for
‘bw.nrd0’
siarproportionbysourceplot: no visible global function definition for
‘polygon’
siarproportionbysourceplot: no visible global function definition for
‘lines’
siarproportionbysourceplot: no visible global function definition for
‘legend’
siarproportionbysourceplot: no visible global function definition for
‘strwidth’
siarsinglegrouprun: no visible global function definition for ‘menu’
siarsolomultigrouprun: no visible global function definition for ‘menu’
siarsolosinglegrouprun: no visible global function definition for
‘menu’
standard.ellipse: no visible global function definition for ‘cov’
standard.ellipse: no visible global function definition for ‘qf’
Undefined global functions or variables:
axis bw.nrd0 chull close.screen contour cor cov cov2cor devAskNewPage
geweke.diag gray hdr hist kde2d legend lines median menu mtext
overlap.xypolygon pairs par pnorm points polygon qf quartz read.table
rect rmultireg runireg screen sd split.screen strwidth text x11
Consider adding
importFrom("grDevices", "chull", "devAskNewPage", "gray", "quartz",
"x11")
importFrom("graphics", "axis", "close.screen", "contour", "hist",
"legend", "lines", "mtext", "pairs", "par", "points",
"polygon", "rect", "screen", "split.screen", "strwidth",
"text")
importFrom("stats", "bw.nrd0", "cor", "cov", "cov2cor", "median",
"pnorm", "qf", "sd")
importFrom("utils", "menu", "read.table")
to your NAMESPACE file.
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64