CRAN Package Check Results for Package Keyboard

Last updated on 2022-05-24 15:52:49 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.1.0 6.57 59.72 66.29 ERROR
r-devel-linux-x86_64-debian-gcc 0.1.0 5.15 45.02 50.17 ERROR
r-devel-linux-x86_64-fedora-clang 0.1.0 80.14 ERROR
r-devel-linux-x86_64-fedora-gcc 0.1.0 79.13 ERROR
r-devel-windows-x86_64 0.1.0 17.00 73.00 90.00 NOTE
r-patched-linux-x86_64 0.1.0 7.28 58.51 65.79 ERROR
r-release-linux-x86_64 0.1.0 ERROR
r-release-macos-arm64 0.1.0 22.00 NOTE
r-release-macos-x86_64 0.1.0 30.00 NOTE
r-release-windows-x86_64 0.1.0 25.00 76.00 101.00 NOTE
r-oldrel-macos-arm64 0.1.0 26.00 NOTE
r-oldrel-macos-x86_64 0.1.0 44.00 NOTE
r-oldrel-windows-ix86+x86_64 0.1.0 11.00 70.00 81.00 NOTE

Check Details

Version: 0.1.0
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: 'epade'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.1.0
Check: LazyData
Result: NOTE
     'LazyData' is specified without a 'data' directory
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.1.0
Check: examples
Result: ERROR
    Running examples in 'Keyboard-Ex.R' failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: select.mtd.comb.kb
    > ### Title: Maximum Tolerated Dose (MTD) Selection for Drug-combination
    > ### Trials
    > ### Aliases: select.mtd.comb.kb
    >
    > ### ** Examples
    >
    > ### Drug-combination trial ###
    >
    > ## Select the MTD based on the data from a 3 x 5 combination trial
    > n <- matrix(c(3, 5, 0, 0, 0,
    + 7, 6, 15, 0, 0,
    + 0, 0, 4, 0, 0), ncol=5, byrow=TRUE)
    > y <- matrix(c(0, 1, 0, 0, 0,
    + 1, 1, 4, 0, 0,
    + 0, 0, 2, 0, 0), ncol=5, byrow=TRUE)
    >
    > sel.comb <- select.mtd.comb.kb(target=0.3, npts=n, ntox=y)
    >
    > summary.kb(sel.comb)
    The MTD is dose combination ( 2 , 3 )
    
    Isotonic estimates of toxicity probabilities for combinations are
     0.02 0.19 NA NA NA
     0.15 0.19 0.27 NA NA
     NA NA 0.50 NA NA
    
    NOTE: no estimate is provided for the doses at which no patient was treated.
    
    > plot.kb(sel.comb)
    Error: Package "epade" needed for this function to work.Please install it.
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.1.0
Check: examples
Result: ERROR
    Running examples in ‘Keyboard-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: select.mtd.comb.kb
    > ### Title: Maximum Tolerated Dose (MTD) Selection for Drug-combination
    > ### Trials
    > ### Aliases: select.mtd.comb.kb
    >
    > ### ** Examples
    >
    > ### Drug-combination trial ###
    >
    > ## Select the MTD based on the data from a 3 x 5 combination trial
    > n <- matrix(c(3, 5, 0, 0, 0,
    + 7, 6, 15, 0, 0,
    + 0, 0, 4, 0, 0), ncol=5, byrow=TRUE)
    > y <- matrix(c(0, 1, 0, 0, 0,
    + 1, 1, 4, 0, 0,
    + 0, 0, 2, 0, 0), ncol=5, byrow=TRUE)
    >
    > sel.comb <- select.mtd.comb.kb(target=0.3, npts=n, ntox=y)
    >
    > summary.kb(sel.comb)
    The MTD is dose combination ( 2 , 3 )
    
    Isotonic estimates of toxicity probabilities for combinations are
     0.02 0.19 NA NA NA
     0.15 0.19 0.27 NA NA
     NA NA 0.50 NA NA
    
    NOTE: no estimate is provided for the doses at which no patient was treated.
    
    > plot.kb(sel.comb)
    Error: Package "epade" needed for this function to work.Please install it.
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc