Last updated on 2022-10-09 05:49:27 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.2.2 | 13.26 | 162.22 | 175.48 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.2.2 | 10.17 | 123.54 | 133.71 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.2.2 | 236.08 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 1.2.2 | 229.50 | OK | |||
| r-devel-windows-x86_64 | 1.2.2 | 223.00 | 221.00 | 444.00 | NOTE | |
| r-patched-linux-x86_64 | 1.2.2 | 12.99 | 152.55 | 165.54 | OK | |
| r-release-linux-x86_64 | 1.2.2 | 8.68 | 150.15 | 158.83 | OK | |
| r-release-macos-arm64 | 1.2.2 | 57.00 | NOTE | |||
| r-release-macos-x86_64 | 1.2.2 | 101.00 | NOTE | |||
| r-release-windows-x86_64 | 1.2.2 | 21.00 | 212.00 | 233.00 | NOTE | |
| r-oldrel-macos-arm64 | 1.2.2 | 64.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 1.2.2 | 79.00 | NOTE | |||
| r-oldrel-windows-ix86+x86_64 | 1.2.2 | 30.00 | 192.00 | 222.00 | ERROR |
Version: 1.2.2
Check: installed package size
Result: NOTE
installed size is 6.0Mb
sub-directories of 1Mb or more:
doc 4.2Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64
Version: 1.2.2
Check: tests
Result: ERROR
Running 'testthat.R' [29s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(clinDataReview)
>
> test_check("clinDataReview")
adding: report.html (deflated 64%)
adding: report_dependencies1ab68745f4f9e/ (stored 0%)
adding: report_dependencies1ab68745f4f9e/file1ab682ab44159.html (deflated 8%)
[ FAIL 3 | WARN 1 | SKIP 23 | PASS 424 ]
== Skipped tests ===============================================================
* On CRAN (23)
== Failed tests ================================================================
-- Error (test_render_clinDataReviewReport.R:219:2): The creation of html file from markdown files for specified config files is successful --
Error: Using anchor_sections requires Pandoc 2.0+
Backtrace:
x
1. \-clinDataReview::convertMdToHtml(...) at test_render_clinDataReviewReport.R:219:8
2. \-rmarkdown::render(...)
3. \-rmarkdown:::create_output_format(output_format$name, output_format$options)
4. +-base::do.call(output_format_func, options)
5. \-clinDataReview (local) `<fn>`()
6. \-bookdown::gitbook(...)
7. \-bookdown::html_document2(...)
8. \-rmarkdown::html_document(...)
9. \-rmarkdown:::add_anchor_sections(anchor_sections, section_divs)
-- Error (test_reportingFormats.R:5:2): A gitbook clinical data review format is correctly created --
Error: Using anchor_sections requires Pandoc 2.0+
Backtrace:
x
1. \-clinDataReview::gitbook_clinDataReview_report() at test_reportingFormats.R:5:8
2. \-bookdown::gitbook(...)
3. \-bookdown::html_document2(...)
4. \-rmarkdown::html_document(...)
5. \-rmarkdown:::add_anchor_sections(anchor_sections, section_divs)
-- Error (test_reportingFormats.R:58:2): A logo is correctly added to a gitbook clinical data review report --
Error: Using anchor_sections requires Pandoc 2.0+
Backtrace:
x
1. +-testthat::expect_silent(res <- gitbook_clinDataReview_report(logo = pathPlotBasic)) at test_reportingFormats.R:58:8
2. | \-testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. | +-testthat (local) .capture(...)
4. | | +-withr::with_output_sink(...)
5. | | | \-base::force(code)
6. | | +-base::withCallingHandlers(...)
7. | | \-base::withVisible(code)
8. | \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. \-clinDataReview::gitbook_clinDataReview_report(logo = pathPlotBasic)
10. \-bookdown::gitbook(...)
11. \-bookdown::html_document2(...)
12. \-rmarkdown::html_document(...)
13. \-rmarkdown:::add_anchor_sections(anchor_sections, section_divs)
[ FAIL 3 | WARN 1 | SKIP 23 | PASS 424 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-windows-ix86+x86_64