Last updated on 2022-11-09 03:57:50 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.2.1 | 146.84 | 334.49 | 481.33 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 1.2.1 | 125.30 | 246.27 | 371.57 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 1.2.1 | 626.83 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 1.2.1 | 637.23 | NOTE | |||
| r-devel-windows-x86_64 | 1.2.1 | 165.00 | 450.00 | 615.00 | NOTE | |
| r-patched-linux-x86_64 | 1.2.1 | 139.53 | 313.23 | 452.76 | NOTE | |
| r-release-linux-x86_64 | 1.2.1 | 120.62 | 309.75 | 430.37 | NOTE | |
| r-release-macos-arm64 | 1.2.1 | 127.00 | NOTE | |||
| r-release-macos-x86_64 | 1.2.1 | 234.00 | NOTE | |||
| r-release-windows-x86_64 | 1.2.1 | 172.00 | 429.00 | 601.00 | NOTE | |
| r-oldrel-macos-arm64 | 1.2.1 | 132.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 1.2.1 | 225.00 | NOTE | |||
| r-oldrel-windows-ix86+x86_64 | 1.2.1 | 290.00 | 494.00 | 784.00 | NOTE |
Version: 1.2.1
Check: R code for possible problems
Result: NOTE
Found the following calls to attach():
File 'rbmi/R/parallel.R':
attach(getNamespace("rbmi"))
See section 'Good practice' in '?attach'.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 1.2.1
Check: for GNU extensions in Makefiles
Result: NOTE
GNU make is a SystemRequirements.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64
Version: 1.2.1
Check: dependencies in R code
Result: NOTE
Namespaces in Imports field not imported from:
‘RcppParallel’ ‘rstantools’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 1.2.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [185s/493s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(rbmi)
>
> test_check("rbmi")
[ FAIL 1 | WARN 0 | SKIP 12 | PASS 1033 ]
══ Skipped tests ═══════════════════════════════════════════════════════════════
• is_full_test() is not TRUE (12)
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-mmrm.R:379'): MMRM returns expected estimates under different model specifications ──
`fit_actual` (`actual`) not equal to `fit_expected` (`expected`).
actual$beta | expected$beta
[1] 5.52 - 5.57 [1]
[2] 2.94 - 2.87 [2]
[3] -1.17 - -1.03 [3]
[4] 0.32 - 0.48 [4]
[5] 3.14 - 3.18 [5]
[6] 3.48 - 3.54 [6]
[7] -0.17 - -0.24 [7]
[8] -0.52 - -1.07 [8]
[9] 0.28 - 0.23 [9]
[10] 1.75 - 1.71 [10]
... ... ... and 2 more ...
actual$sigma$A vs expected$sigma$A
[,1] [,2] [,3]
- actual$sigma$A[1, ] 102.168132 78.426618 112.08161
+ expected$sigma$A[1, ] 21.954743 8.574749 24.90025
- actual$sigma$A[2, ] 78.426618 71.857836 88.50042
+ expected$sigma$A[2, ] 8.574749 10.796285 12.97493
- actual$sigma$A[3, ] 112.081606 88.500416 145.28145
+ expected$sigma$A[3, ] 24.900249 12.974927 51.80736
actual$sigma$B vs expected$sigma$B
[,1] [,2] [,3]
- actual$sigma$B[1, ] 121.158597 87.501460 134.948362
+ expected$sigma$B[1, ] 34.097158 5.350615 38.277396
- actual$sigma$B[2, ] 87.501460 89.989775 102.791785
+ expected$sigma$B[2, ] 5.350615 8.307257 4.823669
- actual$sigma$B[3, ] 134.948362 102.791785 194.258009
+ expected$sigma$B[3, ] 38.277396 4.823669 78.642838
Backtrace:
▆
1. └─rbmi (local) runtests(FALSE, FALSE) at test-mmrm.R:379:4
2. └─rbmi (local) test_mmrm_numeric(dat, formula_expr, same_cov, scale) at test-mmrm.R:354:8
3. └─testthat::expect_equal(fit_actual, fit_expected) at test-mmrm.R:153:8
[ FAIL 1 | WARN 0 | SKIP 12 | PASS 1033 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.2.1
Check: installed package size
Result: NOTE
installed size is 40.6Mb
sub-directories of 1Mb or more:
libs 39.4Mb
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64