Last updated on 2022-11-19 08:53:48 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.1.0 | 39.58 | 441.81 | 481.39 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 2.1.0 | 33.70 | 322.42 | 356.12 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 2.1.0 | 630.13 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 2.1.0 | 604.77 | OK | |||
| r-devel-windows-x86_64 | 2.1.0 | 49.00 | 574.00 | 623.00 | OK | |
| r-patched-linux-x86_64 | 2.1.0 | 43.19 | 417.29 | 460.48 | ERROR | |
| r-release-linux-x86_64 | 2.1.0 | 35.52 | 385.95 | 421.47 | OK | |
| r-release-macos-arm64 | 2.1.0 | 121.00 | OK | |||
| r-release-macos-x86_64 | 2.1.0 | 234.00 | OK | |||
| r-release-windows-x86_64 | 2.1.0 | 48.00 | 576.00 | 624.00 | OK | |
| r-oldrel-macos-arm64 | 2.1.0 | 138.00 | OK | |||
| r-oldrel-macos-x86_64 | 2.1.0 | 240.00 | OK | |||
| r-oldrel-windows-ix86+x86_64 | 2.1.0 | 87.00 | 563.00 | 650.00 | WARN |
Version: 2.1.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building 'dynamAedes_local.Rmd' using rmarkdown
Loading required package: spatstat
Loading required package: spatstat.data
Loading required package: spatstat.geom
spatstat.geom 3.0-3
Loading required package: spatstat.random
spatstat.random 3.0-1
Loading required package: spatstat.explore
Loading required package: nlme
spatstat.explore 3.0-5
Loading required package: spatstat.model
Loading required package: rpart
spatstat.model 3.0-2
Loading required package: spatstat.linnet
spatstat.linnet 3.0-3
spatstat 3.0-2
For an introduction to spatstat, type 'beginner'
Loading required package: sp
Loading required package: gstat
Attaching package: 'gstat'
The following object is masked from 'package:spatstat.explore':
idw
Loading required package: parallel
Loading required package: eesim
Loading required package: tidyverse
-- Attaching packages --------------------------------------- tidyverse 1.3.2 --
v ggplot2 3.4.0 v purrr 0.3.5
v tibble 3.1.8 v dplyr 1.0.10
v tidyr 1.2.1 v stringr 1.4.1
v readr 2.1.3 v forcats 0.5.2
-- Conflicts ------------------------------------------ tidyverse_conflicts() --
x dplyr::collapse() masks nlme::collapse()
x dplyr::filter() masks stats::filter()
x dplyr::lag() masks stats::lag()
Loading required package: geosphere
Attaching package: 'geosphere'
The following object is masked from 'package:spatstat.geom':
perimeter
Loading required package: rgeos
rgeos version: 0.5-9, (SVN revision 684)
GEOS runtime version: 3.11.0-CAPI-1.17.0
Please note that rgeos will be retired by the end of 2023,
plan transition to sf functions using GEOS at your earliest convenience.
GEOS using OverlayNG
Linking to sp version: 1.5-1
Polygon checking: TRUE
Loading required package: dynamAedes
Loading required package: raster
Attaching package: 'raster'
The following object is masked from 'package:dplyr':
select
The following object is masked from 'package:nlme':
getData
starting worker pid=3026260 on localhost:11843 at 12:14:49.497
##########################################
## Life cycle iterations have begun... ##
##########################################
Loading required package: dynamAedes
Loading required package: raster
Loading required package: sp
loaded dynamAedes and set parent environment
|
|%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%| 100%[1] "No active dispersing females today..."
2000-06-03. Day 1-- of iteration 1 has ended. Population is e: 0 i: 0 a: 4642 d: 0 eh: 0 el: 96449
Max t: 28.528
[1] "No active dispersing females today..."
2000-06-04. Day 2-- of iteration 1 has ended. Population is e: 96449 i: 0 a: 908 d: 0 eh: 0 el: 87670
Max t: 33.067
2000-06-05. Day 3-- of iteration 1 has ended. Population is e: 145164 i: 0 a: 667 d: 0 eh: 0 el: 0
Max t: 33.176
[1] "No active dispersing females today..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-06. Day 4-- of iteration 1 has ended. Population is e: 97611 i: 0 a: 552 d: 0 eh: 0 el: 11607
Max t: 32.396
[1] "No active dispersing females today..."
2000-06-07. Day 5-- of iteration 1 has ended. Population is e: 94504 i: 16925 a: 127 d: 0 eh: 16925 el: 10194
Max t: 29.701
2000-06-08. Day 6-- of iteration 1 has ended. Population is e: 70933 i: 33194 a: 103 d: 0 eh: 19439 el: 0
Max t: 31.715
[1] "No active dispersing females today..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-09. Day 7-- of iteration 1 has ended. Population is e: 46352 i: 40022 a: 89 d: 0 eh: 12608 el: 2422
Max t: 31.506
[1] "No active dispersing females today..."
2000-06-10. Day 8-- of iteration 1 has ended. Population is e: 30106 i: 31075 a: 18 d: 0 eh: 5828 el: 2011
Max t: 33.415
2000-06-11. Day 9-- of iteration 1 has ended. Population is e: 24281 i: 33299 a: 17 d: 0 eh: 7840 el: 0
Max t: 31.558
[1] "No active dispersing females today..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-12. Day 10-- of iteration 1 has ended. Population is e: 14300 i: 17808 a: 4 d: 0 eh: 2164 el: 325
Max t: 34.528
[1] "No active dispersing females today..."
2000-06-13. Day 11-- of iteration 1 has ended. Population is e: 11892 i: 16686 a: 619 d: 0 eh: 4002 el: 155
Max t: 31.783
2000-06-14. Day 12-- of iteration 1 has ended. Population is e: 7396 i: 7958 a: 875 d: 0 eh: 1039 el: 0
Max t: 34.908
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-15. Day 13-- of iteration 1 has ended. Population is e: 6247 i: 8047 a: 1405 d: 0 eh: 2733 el: 6817
Max t: 30.567
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-16. Day 14-- of iteration 1 has ended. Population is e: 10264 i: 8226 a: 1331 d: 0 eh: 1545 el: 14118
Max t: 30.22
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-17. Day 15-- of iteration 1 has ended. Population is e: 16134 i: 708 a: 60 d: 0 eh: 1 el: 0
Max t: 39.83
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-18. Day 16-- of iteration 1 has ended. Population is e: 11704 i: 671 a: 46 d: 0 eh: 603 el: 359
Max t: 32.185
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-19. Day 17-- of iteration 1 has ended. Population is e: 6882 i: 689 a: 34 d: 0 eh: 274 el: 1119
Max t: 33.781
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-20. Day 18-- of iteration 1 has ended. Population is e: 4759 i: 952 a: 22 d: 0 eh: 644 el: 810
Max t: 34.575
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-21. Day 19-- of iteration 1 has ended. Population is e: 4628 i: 1678 a: 20 d: 0 eh: 938 el: 319
Max t: 32.281
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-22. Day 20-- of iteration 1 has ended. Population is e: 3330 i: 1179 a: 17 d: 0 eh: 358 el: 326
Max t: 34.466
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-23. Day 21-- of iteration 1 has ended. Population is e: 2893 i: 1159 a: 6 d: 0 eh: 480 el: 151
Max t: 34.218
[1] "No active dispersing females today..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-24. Day 22-- of iteration 1 has ended. Population is e: 2354 i: 1431 a: 13 d: 0 eh: 604 el: 84
Max t: 33.042
2000-06-25. Day 23-- of iteration 1 has ended. Population is e: 1676 i: 1345 a: 14 d: 0 eh: 345 el: 0
Max t: 33.69
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-26. Day 24-- of iteration 1 has ended. Population is e: 1241 i: 1295 a: 29 d: 0 eh: 356 el: 364
Max t: 33.53
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-27. Day 25-- of iteration 1 has ended. Population is e: 1145 i: 385 a: 14 d: 0 eh: 21 el: 103
Max t: 38.147
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-28. Day 26-- of iteration 1 has ended. Population is e: 1114 i: 585 a: 25 d: 0 eh: 290 el: 132
Max t: 32.12
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-29. Day 27-- of iteration 1 has ended. Population is e: 901 i: 709 a: 38 d: 0 eh: 214 el: 229
Max t: 31.405
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-30. Day 28-- of iteration 1 has ended. Population is e: 782 i: 596 a: 50 d: 0 eh: 117 el: 804
Max t: 33.832
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-01. Day 29-- of iteration 1 has ended. Population is e: 1322 i: 449 a: 65 d: 0 eh: 80 el: 813
Max t: 34.434
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-02. Day 30-- of iteration 1 has ended. Population is e: 1740 i: 342 a: 70 d: 1 eh: 56 el: 779
Max t: 34.72
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-03. Day 31-- of iteration 1 has ended. Population is e: 2239 i: 385 a: 68 d: 0 eh: 115 el: 1045
Max t: 32.843
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-04. Day 32-- of iteration 1 has ended. Population is e: 2942 i: 641 a: 63 d: 0 eh: 325 el: 745
Max t: 31.574
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-05. Day 33-- of iteration 1 has ended. Population is e: 2386 i: 505 a: 49 d: 0 eh: 159 el: 571
Max t: 36.498
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-06. Day 34-- of iteration 1 has ended. Population is e: 2465 i: 785 a: 44 d: 0 eh: 365 el: 484
Max t: 33.088
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-07. Day 35-- of iteration 1 has ended. Population is e: 2370 i: 1136 a: 42 d: 0 eh: 444 el: 637
Max t: 31.992
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-08. Day 36-- of iteration 1 has ended. Population is e: 2255 i: 1343 a: 26 d: 0 eh: 368 el: 612
Max t: 33.313
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-09. Day 37-- of iteration 1 has ended. Population is e: 2215 i: 1489 a: 27 d: 0 eh: 351 el: 548
Max t: 33.38
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-10. Day 38-- of iteration 1 has ended. Population is e: 1857 i: 1141 a: 38 d: 0 eh: 158 el: 388
Max t: 36.124
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-11. Day 39-- of iteration 1 has ended. Population is e: 1791 i: 1216 a: 63 d: 0 eh: 289 el: 345
Max t: 33.931
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-12. Day 40-- of iteration 1 has ended. Population is e: 1505 i: 1025 a: 84 d: 0 eh: 203 el: 503
Max t: 35.316
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-13. Day 41-- of iteration 1 has ended. Population is e: 1632 i: 1103 a: 120 d: 0 eh: 303 el: 1032
Max t: 32.632
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-14. Day 42-- of iteration 1 has ended. Population is e: 2116 i: 1041 a: 142 d: 0 eh: 184 el: 1204
Max t: 34.101
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-15. Day 43-- of iteration 1 has ended. Population is e: 2862 i: 1071 a: 145 d: 0 eh: 236 el: 1474
Max t: 32.916
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-16. Day 44-- of iteration 1 has ended. Population is e: 3649 i: 1094 a: 138 d: 0 eh: 229 el: 1805
Max t: 33.752
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-17. Day 45-- of iteration 1 has ended. Population is e: 4869 i: 1442 a: 150 d: 0 eh: 513 el: 2546
Max t: 31.605
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-18. Day 46-- of iteration 1 has ended. Population is e: 6536 i: 1973 a: 159 d: 0 eh: 702 el: 1734
Max t: 30.666
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-19. Day 47-- of iteration 1 has ended. Population is e: 4844 i: 1221 a: 115 d: 0 eh: 228 el: 1379
Max t: 37.596
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-20. Day 48-- of iteration 1 has ended. Population is e: 5015 i: 1419 a: 133 d: 0 eh: 551 el: 1818
Max t: 34.574
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-21. Day 49-- of iteration 1 has ended. Population is e: 5984 i: 2352 a: 136 d: 0 eh: 1070 el: 1933
Max t: 30.584
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-22. Day 50-- of iteration 1 has ended. Population is e: 6301 i: 3060 a: 127 d: 0 eh: 918 el: 1799
Max t: 31.858
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-23. Day 51-- of iteration 1 has ended. Population is e: 6714 i: 3885 a: 154 d: 1 eh: 1104 el: 1372
Max t: 30.56
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-24. Day 52-- of iteration 1 has ended. Population is e: 4401 i: 2204 a: 135 d: 0 eh: 231 el: 1113
Max t: 37.626
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-25. Day 53-- of iteration 1 has ended. Population is e: 4233 i: 2045 a: 149 d: 1 eh: 540 el: 1478
Max t: 35.659
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-26. Day 54-- of iteration 1 has ended. Population is e: 4796 i: 2600 a: 174 d: 0 eh: 879 el: 1813
Max t: 32.225
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-27. Day 55-- of iteration 1 has ended. Population is e: 5063 i: 2687 a: 210 d: 0 eh: 557 el: 2391
Max t: 33.831
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-28. Day 56-- of iteration 1 has ended. Population is e: 6409 i: 3085 a: 278 d: 1 eh: 795 el: 2585
Max t: 31.699
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-29. Day 57-- of iteration 1 has ended. Population is e: 7599 i: 3557 a: 341 d: 2 eh: 909 el: 3921
Max t: 31.456
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-30. Day 58-- of iteration 1 has ended. Population is e: 10057 i: 4319 a: 353 d: 4 eh: 1143 el: 4975
Max t: 30.678
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-31. Day 59-- of iteration 1 has ended. Population is e: 13058 i: 5349 a: 358 d: 6 eh: 1493 el: 4234
Max t: 30.967
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-08-01. Day 60-- of iteration 1 has ended. Population is e: 12238 i: 4537 a: 382 d: 3 eh: 777 el: 3227
Max t: 35.589
########################################
## Iterations concluded. ##
########################################
Warning: Using `size` aesthetic for lines was deprecated in ggplot2 3.4.0.
i Please use `linewidth` instead.
--- finished re-building 'dynamAedes_local.Rmd'
--- re-building 'dynamAedes_punctual.Rmd' using rmarkdown
Loading required package: spatstat
Loading required package: spatstat.data
Loading required package: spatstat.geom
spatstat.geom 3.0-3
Loading required package: spatstat.random
spatstat.random 3.0-1
Loading required package: spatstat.explore
Loading required package: nlme
spatstat.explore 3.0-5
Loading required package: spatstat.model
Loading required package: rpart
spatstat.model 3.0-2
Loading required package: spatstat.linnet
spatstat.linnet 3.0-3
spatstat 3.0-2
For an introduction to spatstat, type 'beginner'
Loading required package: sp
Loading required package: gstat
Attaching package: 'gstat'
The following object is masked from 'package:spatstat.explore':
idw
Loading required package: parallel
Loading required package: eesim
Loading required package: tidyverse
-- Attaching packages --------------------------------------- tidyverse 1.3.2 --
v ggplot2 3.4.0 v purrr 0.3.5
v tibble 3.1.8 v dplyr 1.0.10
v tidyr 1.2.1 v stringr 1.4.1
v readr 2.1.3 v forcats 0.5.2
-- Conflicts ------------------------------------------ tidyverse_conflicts() --
x dplyr::collapse() masks nlme::collapse()
x dplyr::filter() masks stats::filter()
x dplyr::lag() masks stats::lag()
Loading required package: geosphere
Attaching package: 'geosphere'
The following object is masked from 'package:spatstat.geom':
perimeter
Loading required package: rgeos
rgeos version: 0.5-9, (SVN revision 684)
GEOS runtime version: 3.11.0-CAPI-1.17.0
Please note that rgeos will be retired by the end of 2023,
plan transition to sf functions using GEOS at your earliest convenience.
GEOS using OverlayNG
Linking to sp version: 1.5-1
Polygon checking: TRUE
Loading required package: dynamAedes
Loading required package: raster
Attaching package: 'raster'
The following object is masked from 'package:dplyr':
select
The following object is masked from 'package:nlme':
getData
Warning in max(cells.coords[, 2]) :
no non-missing arguments to max; returning -Inf
### Model without dispersal ###
starting worker pid=3061380 on localhost:11437 at 12:17:30.890
##########################################
## Life cycle iterations have begun... ##
##########################################
Loading required package: dynamAedes
Loading required package: raster
Loading required package: sp
loaded dynamAedes and set parent environment
|
|%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%| 100%
########################################
## Iterations concluded. ##
########################################
Warning: Using `size` aesthetic for lines was deprecated in ggplot2 3.4.0.
i Please use `linewidth` instead.
--- finished re-building 'dynamAedes_punctual.Rmd'
--- re-building 'dynamAedes_regional.Rmd' using rmarkdown
Loading required package: spatstat
Loading required package: spatstat.data
Loading required package: spatstat.geom
spatstat.geom 3.0-3
Loading required package: spatstat.random
spatstat.random 3.0-1
Loading required package: spatstat.explore
Loading required package: nlme
spatstat.explore 3.0-5
Loading required package: spatstat.model
Loading required package: rpart
spatstat.model 3.0-2
Loading required package: spatstat.linnet
spatstat.linnet 3.0-3
spatstat 3.0-2
For an introduction to spatstat, type 'beginner'
Loading required package: sp
Loading required package: gstat
Attaching package: 'gstat'
The following object is masked from 'package:spatstat.explore':
idw
Loading required package: parallel
Loading required package: eesim
Loading required package: tidyverse
-- Attaching packages --------------------------------------- tidyverse 1.3.2 --
v ggplot2 3.4.0 v purrr 0.3.5
v tibble 3.1.8 v dplyr 1.0.10
v tidyr 1.2.1 v stringr 1.4.1
v readr 2.1.3 v forcats 0.5.2
-- Conflicts ------------------------------------------ tidyverse_conflicts() --
x dplyr::collapse() masks nlme::collapse()
x dplyr::filter() masks stats::filter()
x dplyr::lag() masks stats::lag()
Loading required package: geosphere
Attaching package: 'geosphere'
The following object is masked from 'package:spatstat.geom':
perimeter
Loading required package: rgeos
rgeos version: 0.5-9, (SVN revision 684)
GEOS runtime version: 3.11.0-CAPI-1.17.0
Please note that rgeos will be retired by the end of 2023,
plan transition to sf functions using GEOS at your earliest convenience.
GEOS using OverlayNG
Linking to sp version: 1.5-1
Polygon checking: TRUE
Loading required package: dynamAedes
Loading required package: raster
Attaching package: 'raster'
The following object is masked from 'package:dplyr':
select
The following object is masked from 'package:nlme':
getData
inside
Quitting from lines 182-196 (dynamAedes_regional.Rmd)
Error: processing vignette 'dynamAedes_regional.Rmd' failed with diagnostics:
error in evaluating the argument 'obj' in selecting a method for function 'coordinates': package rgdal is required for spTransform methods
--- failed re-building 'dynamAedes_regional.Rmd'
SUMMARY: processing the following file failed:
'dynamAedes_regional.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 2.1.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘dynamAedes_local.Rmd’ using rmarkdown
Loading required package: spatstat
Loading required package: spatstat.data
Loading required package: spatstat.geom
spatstat.geom 3.0-3
Loading required package: spatstat.random
spatstat.random 3.0-1
Loading required package: spatstat.explore
Loading required package: nlme
spatstat.explore 3.0-5
Loading required package: spatstat.model
Loading required package: rpart
spatstat.model 3.0-2
Loading required package: spatstat.linnet
spatstat.linnet 3.0-3
spatstat 3.0-2
For an introduction to spatstat, type 'beginner'
Loading required package: sp
Loading required package: gstat
Attaching package: 'gstat'
The following object is masked from 'package:spatstat.explore':
idw
Loading required package: parallel
Loading required package: eesim
Loading required package: tidyverse
── Attaching packages ─────────────────────────────────────── tidyverse 1.3.2 ──
✔ ggplot2 3.4.0 ✔ purrr 0.3.5
✔ tibble 3.1.8 ✔ dplyr 1.0.10
✔ tidyr 1.2.1 ✔ stringr 1.4.1
✔ readr 2.1.3 ✔ forcats 0.5.2
── Conflicts ────────────────────────────────────────── tidyverse_conflicts() ──
✖ dplyr::collapse() masks nlme::collapse()
✖ dplyr::filter() masks stats::filter()
✖ dplyr::lag() masks stats::lag()
Loading required package: geosphere
Attaching package: 'geosphere'
The following object is masked from 'package:spatstat.geom':
perimeter
Loading required package: rgeos
rgeos version: 0.5-9, (SVN revision 684)
GEOS runtime version: 3.11.0-CAPI-1.17.0
Please note that rgeos will be retired by the end of 2023,
plan transition to sf functions using GEOS at your earliest convenience.
GEOS using OverlayNG
Linking to sp version: 1.5-1
Polygon checking: TRUE
Loading required package: dynamAedes
Loading required package: raster
Attaching package: 'raster'
The following object is masked from 'package:dplyr':
select
The following object is masked from 'package:nlme':
getData
starting worker pid=4154792 on localhost:11963 at 20:28:59.347
##########################################
## Life cycle iterations have begun... ##
##########################################
Loading required package: dynamAedes
Loading required package: raster
Loading required package: sp
loaded dynamAedes and set parent environment
|
|%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%| 100%[1] "No active dispersing females today..."
2000-06-03. Day 1-- of iteration 1 has ended. Population is e: 0 i: 0 a: 4650 d: 0 eh: 0 el: 96587
Max t: 28.528
[1] "No active dispersing females today..."
2000-06-04. Day 2-- of iteration 1 has ended. Population is e: 96587 i: 0 a: 900 d: 0 eh: 0 el: 87383
Max t: 33.067
2000-06-05. Day 3-- of iteration 1 has ended. Population is e: 145106 i: 0 a: 682 d: 0 eh: 0 el: 0
Max t: 33.176
[1] "No active dispersing females today..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-06. Day 4-- of iteration 1 has ended. Population is e: 97461 i: 0 a: 560 d: 0 eh: 0 el: 12502
Max t: 32.396
[1] "No active dispersing females today..."
2000-06-07. Day 5-- of iteration 1 has ended. Population is e: 95240 i: 16739 a: 130 d: 0 eh: 16739 el: 10319
Max t: 29.701
2000-06-08. Day 6-- of iteration 1 has ended. Population is e: 71468 i: 32864 a: 113 d: 0 eh: 19361 el: 0
Max t: 31.715
[1] "No active dispersing females today..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-09. Day 7-- of iteration 1 has ended. Population is e: 46902 i: 39611 a: 94 d: 0 eh: 12574 el: 2425
Max t: 31.506
[1] "No active dispersing females today..."
2000-06-10. Day 8-- of iteration 1 has ended. Population is e: 30477 i: 30838 a: 19 d: 0 eh: 5845 el: 1977
Max t: 33.415
2000-06-11. Day 9-- of iteration 1 has ended. Population is e: 24688 i: 33285 a: 16 d: 0 eh: 8072 el: 0
Max t: 31.558
[1] "No active dispersing females today..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-12. Day 10-- of iteration 1 has ended. Population is e: 14437 i: 18081 a: 7 d: 0 eh: 2207 el: 268
Max t: 34.528
[1] "No active dispersing females today..."
2000-06-13. Day 11-- of iteration 1 has ended. Population is e: 11871 i: 16945 a: 691 d: 0 eh: 4099 el: 144
Max t: 31.783
2000-06-14. Day 12-- of iteration 1 has ended. Population is e: 7309 i: 7955 a: 879 d: 0 eh: 1110 el: 0
Max t: 34.908
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-15. Day 13-- of iteration 1 has ended. Population is e: 6084 i: 7963 a: 1400 d: 0 eh: 2624 el: 8265
Max t: 30.567
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-16. Day 14-- of iteration 1 has ended. Population is e: 11660 i: 8209 a: 1350 d: 0 eh: 1547 el: 17186
Max t: 30.22
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-17. Day 15-- of iteration 1 has ended. Population is e: 19206 i: 704 a: 43 d: 0 eh: 1 el: 0
Max t: 39.83
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-18. Day 16-- of iteration 1 has ended. Population is e: 13670 i: 652 a: 40 d: 0 eh: 597 el: 428
Max t: 32.185
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-19. Day 17-- of iteration 1 has ended. Population is e: 8034 i: 635 a: 33 d: 0 eh: 273 el: 464
Max t: 33.781
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-20. Day 18-- of iteration 1 has ended. Population is e: 4622 i: 1068 a: 24 d: 0 eh: 758 el: 411
Max t: 34.575
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-21. Day 19-- of iteration 1 has ended. Population is e: 4085 i: 1804 a: 17 d: 0 eh: 996 el: 552
Max t: 32.281
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-22. Day 20-- of iteration 1 has ended. Population is e: 3243 i: 1307 a: 7 d: 0 eh: 395 el: 263
Max t: 34.466
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-23. Day 21-- of iteration 1 has ended. Population is e: 2760 i: 1105 a: 6 d: 0 eh: 426 el: 58
Max t: 34.218
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-24. Day 22-- of iteration 1 has ended. Population is e: 2219 i: 1240 a: 15 d: 0 eh: 486 el: 0
Max t: 33.042
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-25. Day 23-- of iteration 1 has ended. Population is e: 1587 i: 1203 a: 12 d: 0 eh: 405 el: 0
Max t: 33.69
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-26. Day 24-- of iteration 1 has ended. Population is e: 1125 i: 1103 a: 16 d: 0 eh: 304 el: 354
Max t: 33.53
[1] "Laying diapausing eggs"
2000-06-27. Day 25-- of iteration 1 has ended. Population is e: 1154 i: 235 a: 9 d: 0 eh: 26 el: 0
Max t: 38.147
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-28. Day 26-- of iteration 1 has ended. Population is e: 1012 i: 460 a: 21 d: 0 eh: 293 el: 0
Max t: 32.12
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-29. Day 27-- of iteration 1 has ended. Population is e: 661 i: 596 a: 22 d: 0 eh: 195 el: 148
Max t: 31.405
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-30. Day 28-- of iteration 1 has ended. Population is e: 515 i: 494 a: 19 d: 0 eh: 86 el: 680
Max t: 33.832
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-01. Day 29-- of iteration 1 has ended. Population is e: 1042 i: 343 a: 23 d: 0 eh: 55 el: 300
Max t: 34.434
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-02. Day 30-- of iteration 1 has ended. Population is e: 967 i: 230 a: 27 d: 0 eh: 46 el: 147
Max t: 34.72
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-03. Day 31-- of iteration 1 has ended. Population is e: 905 i: 246 a: 24 d: 0 eh: 75 el: 604
Max t: 32.843
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-04. Day 32-- of iteration 1 has ended. Population is e: 1341 i: 350 a: 38 d: 0 eh: 180 el: 444
Max t: 31.574
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-05. Day 33-- of iteration 1 has ended. Population is e: 1189 i: 224 a: 30 d: 0 eh: 78 el: 287
Max t: 36.498
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-06. Day 34-- of iteration 1 has ended. Population is e: 1243 i: 312 a: 32 d: 0 eh: 136 el: 349
Max t: 33.088
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-07. Day 35-- of iteration 1 has ended. Population is e: 1335 i: 482 a: 23 d: 0 eh: 210 el: 438
Max t: 31.992
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-08. Day 36-- of iteration 1 has ended. Population is e: 1400 i: 606 a: 17 d: 0 eh: 196 el: 277
Max t: 33.313
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-09. Day 37-- of iteration 1 has ended. Population is e: 1302 i: 725 a: 15 d: 0 eh: 196 el: 77
Max t: 33.38
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-10. Day 38-- of iteration 1 has ended. Population is e: 864 i: 554 a: 24 d: 0 eh: 90 el: 0
Max t: 36.124
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-11. Day 39-- of iteration 1 has ended. Population is e: 670 i: 642 a: 33 d: 0 eh: 211 el: 202
Max t: 33.931
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-12. Day 40-- of iteration 1 has ended. Population is e: 602 i: 598 a: 42 d: 0 eh: 130 el: 361
Max t: 35.316
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-13. Day 41-- of iteration 1 has ended. Population is e: 776 i: 634 a: 45 d: 0 eh: 127 el: 719
Max t: 32.632
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-14. Day 42-- of iteration 1 has ended. Population is e: 1224 i: 552 a: 67 d: 0 eh: 47 el: 785
Max t: 34.101
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-15. Day 43-- of iteration 1 has ended. Population is e: 1778 i: 504 a: 81 d: 0 eh: 65 el: 816
Max t: 32.916
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-16. Day 44-- of iteration 1 has ended. Population is e: 2197 i: 525 a: 78 d: 0 eh: 111 el: 1223
Max t: 33.752
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-17. Day 45-- of iteration 1 has ended. Population is e: 3065 i: 729 a: 89 d: 1 eh: 318 el: 1362
Max t: 31.605
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-18. Day 46-- of iteration 1 has ended. Population is e: 3863 i: 1108 a: 90 d: 1 eh: 472 el: 701
Max t: 30.666
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-19. Day 47-- of iteration 1 has ended. Population is e: 2480 i: 676 a: 74 d: 0 eh: 114 el: 867
Max t: 37.596
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-20. Day 48-- of iteration 1 has ended. Population is e: 2760 i: 789 a: 74 d: 0 eh: 305 el: 1068
Max t: 34.574
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-21. Day 49-- of iteration 1 has ended. Population is e: 3343 i: 1359 a: 68 d: 0 eh: 645 el: 556
Max t: 30.584
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-22. Day 50-- of iteration 1 has ended. Population is e: 2965 i: 1674 a: 56 d: 0 eh: 429 el: 1115
Max t: 31.858
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-23. Day 51-- of iteration 1 has ended. Population is e: 3445 i: 2076 a: 75 d: 0 eh: 583 el: 1035
Max t: 30.56
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-24. Day 52-- of iteration 1 has ended. Population is e: 2567 i: 1188 a: 65 d: 0 eh: 144 el: 199
Max t: 37.626
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-25. Day 53-- of iteration 1 has ended. Population is e: 1966 i: 1078 a: 75 d: 0 eh: 256 el: 345
Max t: 35.659
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-26. Day 54-- of iteration 1 has ended. Population is e: 1865 i: 1380 a: 89 d: 0 eh: 452 el: 956
Max t: 32.225
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-27. Day 55-- of iteration 1 has ended. Population is e: 2117 i: 1424 a: 116 d: 0 eh: 330 el: 1095
Max t: 33.831
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-28. Day 56-- of iteration 1 has ended. Population is e: 2678 i: 1528 a: 143 d: 0 eh: 313 el: 1028
Max t: 31.699
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-29. Day 57-- of iteration 1 has ended. Population is e: 3148 i: 1550 a: 165 d: 0 eh: 238 el: 2082
Max t: 31.456
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-30. Day 58-- of iteration 1 has ended. Population is e: 4727 i: 1861 a: 162 d: 0 eh: 496 el: 2219
Max t: 30.678
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-31. Day 59-- of iteration 1 has ended. Population is e: 6110 i: 2307 a: 177 d: 0 eh: 677 el: 1791
Max t: 30.967
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-08-01. Day 60-- of iteration 1 has ended. Population is e: 5573 i: 1892 a: 215 d: 0 eh: 319 el: 1999
Max t: 35.589
########################################
## Iterations concluded. ##
########################################
Warning: Using `size` aesthetic for lines was deprecated in ggplot2 3.4.0.
ℹ Please use `linewidth` instead.
--- finished re-building ‘dynamAedes_local.Rmd’
--- re-building ‘dynamAedes_punctual.Rmd’ using rmarkdown
Loading required package: spatstat
Loading required package: spatstat.data
Loading required package: spatstat.geom
spatstat.geom 3.0-3
Loading required package: spatstat.random
spatstat.random 3.0-1
Loading required package: spatstat.explore
Loading required package: nlme
spatstat.explore 3.0-5
Loading required package: spatstat.model
Loading required package: rpart
spatstat.model 3.0-2
Loading required package: spatstat.linnet
spatstat.linnet 3.0-3
spatstat 3.0-2
For an introduction to spatstat, type 'beginner'
Loading required package: sp
Loading required package: gstat
Attaching package: 'gstat'
The following object is masked from 'package:spatstat.explore':
idw
Loading required package: parallel
Loading required package: eesim
Loading required package: tidyverse
── Attaching packages ─────────────────────────────────────── tidyverse 1.3.2 ──
✔ ggplot2 3.4.0 ✔ purrr 0.3.5
✔ tibble 3.1.8 ✔ dplyr 1.0.10
✔ tidyr 1.2.1 ✔ stringr 1.4.1
✔ readr 2.1.3 ✔ forcats 0.5.2
── Conflicts ────────────────────────────────────────── tidyverse_conflicts() ──
✖ dplyr::collapse() masks nlme::collapse()
✖ dplyr::filter() masks stats::filter()
✖ dplyr::lag() masks stats::lag()
Loading required package: geosphere
Attaching package: 'geosphere'
The following object is masked from 'package:spatstat.geom':
perimeter
Loading required package: rgeos
rgeos version: 0.5-9, (SVN revision 684)
GEOS runtime version: 3.11.0-CAPI-1.17.0
Please note that rgeos will be retired by the end of 2023,
plan transition to sf functions using GEOS at your earliest convenience.
GEOS using OverlayNG
Linking to sp version: 1.5-1
Polygon checking: TRUE
Loading required package: dynamAedes
Loading required package: raster
Attaching package: 'raster'
The following object is masked from 'package:dplyr':
select
The following object is masked from 'package:nlme':
getData
Warning in max(cells.coords[, 2]) :
no non-missing arguments to max; returning -Inf
### Model without dispersal ###
starting worker pid=9926 on localhost:11848 at 20:31:18.520
##########################################
## Life cycle iterations have begun... ##
##########################################
Loading required package: dynamAedes
Loading required package: raster
Loading required package: sp
loaded dynamAedes and set parent environment
|
|%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%| 100%
########################################
## Iterations concluded. ##
########################################
Warning: Using `size` aesthetic for lines was deprecated in ggplot2 3.4.0.
ℹ Please use `linewidth` instead.
--- finished re-building ‘dynamAedes_punctual.Rmd’
--- re-building ‘dynamAedes_regional.Rmd’ using rmarkdown
Loading required package: spatstat
Loading required package: spatstat.data
Loading required package: spatstat.geom
spatstat.geom 3.0-3
Loading required package: spatstat.random
spatstat.random 3.0-1
Loading required package: spatstat.explore
Loading required package: nlme
spatstat.explore 3.0-5
Loading required package: spatstat.model
Loading required package: rpart
spatstat.model 3.0-2
Loading required package: spatstat.linnet
spatstat.linnet 3.0-3
spatstat 3.0-2
For an introduction to spatstat, type 'beginner'
Loading required package: sp
Loading required package: gstat
Attaching package: 'gstat'
The following object is masked from 'package:spatstat.explore':
idw
Loading required package: parallel
Loading required package: eesim
Loading required package: tidyverse
── Attaching packages ─────────────────────────────────────── tidyverse 1.3.2 ──
✔ ggplot2 3.4.0 ✔ purrr 0.3.5
✔ tibble 3.1.8 ✔ dplyr 1.0.10
✔ tidyr 1.2.1 ✔ stringr 1.4.1
✔ readr 2.1.3 ✔ forcats 0.5.2
── Conflicts ────────────────────────────────────────── tidyverse_conflicts() ──
✖ dplyr::collapse() masks nlme::collapse()
✖ dplyr::filter() masks stats::filter()
✖ dplyr::lag() masks stats::lag()
Loading required package: geosphere
Attaching package: 'geosphere'
The following object is masked from 'package:spatstat.geom':
perimeter
Loading required package: rgeos
rgeos version: 0.5-9, (SVN revision 684)
GEOS runtime version: 3.11.0-CAPI-1.17.0
Please note that rgeos will be retired by the end of 2023,
plan transition to sf functions using GEOS at your earliest convenience.
GEOS using OverlayNG
Linking to sp version: 1.5-1
Polygon checking: TRUE
Loading required package: dynamAedes
Loading required package: raster
Attaching package: 'raster'
The following object is masked from 'package:dplyr':
select
The following object is masked from 'package:nlme':
getData
inside
Quitting from lines 182-196 (dynamAedes_regional.Rmd)
Error: processing vignette ‘dynamAedes_regional.Rmd’ failed with diagnostics:
error in evaluating the argument ‘obj’ in selecting a method for function ‘coordinates’: package rgdal is required for spTransform methods
--- failed re-building ‘dynamAedes_regional.Rmd’
SUMMARY: processing the following file failed:
‘dynamAedes_regional.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 2.1.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘dynamAedes_local.Rmd’ using rmarkdown
Loading required package: spatstat
Loading required package: spatstat.data
Loading required package: spatstat.geom
spatstat.geom 3.0-3
Loading required package: spatstat.random
spatstat.random 3.0-1
Loading required package: spatstat.explore
Loading required package: nlme
spatstat.explore 3.0-5
Loading required package: spatstat.model
Loading required package: rpart
spatstat.model 3.0-2
Loading required package: spatstat.linnet
spatstat.linnet 3.0-3
spatstat 3.0-2
For an introduction to spatstat, type 'beginner'
Loading required package: sp
Loading required package: gstat
Attaching package: 'gstat'
The following object is masked from 'package:spatstat.explore':
idw
Loading required package: parallel
Loading required package: eesim
Loading required package: tidyverse
── Attaching packages ─────────────────────────────────────── tidyverse 1.3.2 ──
✔ ggplot2 3.4.0 ✔ purrr 0.3.5
✔ tibble 3.1.8 ✔ dplyr 1.0.10
✔ tidyr 1.2.1 ✔ stringr 1.4.1
✔ readr 2.1.3 ✔ forcats 0.5.2
── Conflicts ────────────────────────────────────────── tidyverse_conflicts() ──
✖ dplyr::collapse() masks nlme::collapse()
✖ dplyr::filter() masks stats::filter()
✖ dplyr::lag() masks stats::lag()
Loading required package: geosphere
Attaching package: 'geosphere'
The following object is masked from 'package:spatstat.geom':
perimeter
Loading required package: rgeos
rgeos version: 0.5-9, (SVN revision 684)
GEOS runtime version: 3.10.2-CAPI-1.16.0
Please note that rgeos will be retired by the end of 2023,
plan transition to sf functions using GEOS at your earliest convenience.
GEOS using OverlayNG
Linking to sp version: 1.5-1
Polygon checking: TRUE
Loading required package: dynamAedes
Loading required package: raster
Attaching package: 'raster'
The following object is masked from 'package:dplyr':
select
The following object is masked from 'package:nlme':
getData
starting worker pid=1351353 on localhost:11730 at 14:03:54.777
##########################################
## Life cycle iterations have begun... ##
##########################################
Loading required package: dynamAedes
Loading required package: raster
Loading required package: sp
loaded dynamAedes and set parent environment
|
|%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%| 100%[1] "No active dispersing females today..."
2000-06-03. Day 1-- of iteration 1 has ended. Population is e: 0 i: 0 a: 4642 d: 0 eh: 0 el: 96449
Max t: 28.528
[1] "No active dispersing females today..."
2000-06-04. Day 2-- of iteration 1 has ended. Population is e: 96449 i: 0 a: 908 d: 0 eh: 0 el: 87670
Max t: 33.067
2000-06-05. Day 3-- of iteration 1 has ended. Population is e: 145164 i: 0 a: 667 d: 0 eh: 0 el: 0
Max t: 33.176
[1] "No active dispersing females today..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-06. Day 4-- of iteration 1 has ended. Population is e: 97611 i: 0 a: 552 d: 0 eh: 0 el: 11607
Max t: 32.396
[1] "No active dispersing females today..."
2000-06-07. Day 5-- of iteration 1 has ended. Population is e: 94504 i: 16925 a: 127 d: 0 eh: 16925 el: 10194
Max t: 29.701
2000-06-08. Day 6-- of iteration 1 has ended. Population is e: 70933 i: 33194 a: 103 d: 0 eh: 19439 el: 0
Max t: 31.715
[1] "No active dispersing females today..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-09. Day 7-- of iteration 1 has ended. Population is e: 46352 i: 40022 a: 89 d: 0 eh: 12608 el: 2422
Max t: 31.506
[1] "No active dispersing females today..."
2000-06-10. Day 8-- of iteration 1 has ended. Population is e: 30106 i: 31075 a: 18 d: 0 eh: 5828 el: 2011
Max t: 33.415
2000-06-11. Day 9-- of iteration 1 has ended. Population is e: 24281 i: 33299 a: 17 d: 0 eh: 7840 el: 0
Max t: 31.558
[1] "No active dispersing females today..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-12. Day 10-- of iteration 1 has ended. Population is e: 14300 i: 17808 a: 4 d: 0 eh: 2164 el: 325
Max t: 34.528
[1] "No active dispersing females today..."
2000-06-13. Day 11-- of iteration 1 has ended. Population is e: 11892 i: 16686 a: 619 d: 0 eh: 4002 el: 155
Max t: 31.783
2000-06-14. Day 12-- of iteration 1 has ended. Population is e: 7396 i: 7958 a: 875 d: 0 eh: 1039 el: 0
Max t: 34.908
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-15. Day 13-- of iteration 1 has ended. Population is e: 6247 i: 8047 a: 1405 d: 0 eh: 2733 el: 6817
Max t: 30.567
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-16. Day 14-- of iteration 1 has ended. Population is e: 10264 i: 8226 a: 1331 d: 0 eh: 1545 el: 14118
Max t: 30.22
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-17. Day 15-- of iteration 1 has ended. Population is e: 16134 i: 708 a: 60 d: 0 eh: 1 el: 0
Max t: 39.83
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-18. Day 16-- of iteration 1 has ended. Population is e: 11704 i: 671 a: 46 d: 0 eh: 603 el: 359
Max t: 32.185
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-19. Day 17-- of iteration 1 has ended. Population is e: 6882 i: 689 a: 34 d: 0 eh: 274 el: 1119
Max t: 33.781
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-20. Day 18-- of iteration 1 has ended. Population is e: 4759 i: 952 a: 22 d: 0 eh: 644 el: 810
Max t: 34.575
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-21. Day 19-- of iteration 1 has ended. Population is e: 4628 i: 1678 a: 20 d: 0 eh: 938 el: 319
Max t: 32.281
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-22. Day 20-- of iteration 1 has ended. Population is e: 3330 i: 1179 a: 17 d: 0 eh: 358 el: 326
Max t: 34.466
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-23. Day 21-- of iteration 1 has ended. Population is e: 2893 i: 1159 a: 6 d: 0 eh: 480 el: 151
Max t: 34.218
[1] "No active dispersing females today..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-24. Day 22-- of iteration 1 has ended. Population is e: 2354 i: 1431 a: 13 d: 0 eh: 604 el: 84
Max t: 33.042
2000-06-25. Day 23-- of iteration 1 has ended. Population is e: 1676 i: 1345 a: 14 d: 0 eh: 345 el: 0
Max t: 33.69
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-26. Day 24-- of iteration 1 has ended. Population is e: 1241 i: 1295 a: 29 d: 0 eh: 356 el: 364
Max t: 33.53
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-27. Day 25-- of iteration 1 has ended. Population is e: 1145 i: 385 a: 14 d: 0 eh: 21 el: 103
Max t: 38.147
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-28. Day 26-- of iteration 1 has ended. Population is e: 1114 i: 585 a: 25 d: 0 eh: 290 el: 132
Max t: 32.12
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-29. Day 27-- of iteration 1 has ended. Population is e: 901 i: 709 a: 38 d: 0 eh: 214 el: 229
Max t: 31.405
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-30. Day 28-- of iteration 1 has ended. Population is e: 782 i: 596 a: 50 d: 0 eh: 117 el: 804
Max t: 33.832
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-01. Day 29-- of iteration 1 has ended. Population is e: 1322 i: 449 a: 65 d: 0 eh: 80 el: 813
Max t: 34.434
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-02. Day 30-- of iteration 1 has ended. Population is e: 1740 i: 342 a: 70 d: 1 eh: 56 el: 779
Max t: 34.72
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-03. Day 31-- of iteration 1 has ended. Population is e: 2239 i: 385 a: 68 d: 0 eh: 115 el: 1045
Max t: 32.843
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-04. Day 32-- of iteration 1 has ended. Population is e: 2942 i: 641 a: 63 d: 0 eh: 325 el: 745
Max t: 31.574
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-05. Day 33-- of iteration 1 has ended. Population is e: 2386 i: 505 a: 49 d: 0 eh: 159 el: 571
Max t: 36.498
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-06. Day 34-- of iteration 1 has ended. Population is e: 2465 i: 785 a: 44 d: 0 eh: 365 el: 484
Max t: 33.088
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-07. Day 35-- of iteration 1 has ended. Population is e: 2370 i: 1136 a: 42 d: 0 eh: 444 el: 637
Max t: 31.992
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-08. Day 36-- of iteration 1 has ended. Population is e: 2255 i: 1343 a: 26 d: 0 eh: 368 el: 612
Max t: 33.313
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-09. Day 37-- of iteration 1 has ended. Population is e: 2215 i: 1489 a: 27 d: 0 eh: 351 el: 548
Max t: 33.38
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-10. Day 38-- of iteration 1 has ended. Population is e: 1857 i: 1141 a: 38 d: 0 eh: 158 el: 388
Max t: 36.124
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-11. Day 39-- of iteration 1 has ended. Population is e: 1791 i: 1216 a: 63 d: 0 eh: 289 el: 345
Max t: 33.931
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-12. Day 40-- of iteration 1 has ended. Population is e: 1505 i: 1025 a: 84 d: 0 eh: 203 el: 503
Max t: 35.316
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-13. Day 41-- of iteration 1 has ended. Population is e: 1632 i: 1103 a: 120 d: 0 eh: 303 el: 1032
Max t: 32.632
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-14. Day 42-- of iteration 1 has ended. Population is e: 2116 i: 1041 a: 142 d: 0 eh: 184 el: 1204
Max t: 34.101
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-15. Day 43-- of iteration 1 has ended. Population is e: 2862 i: 1071 a: 145 d: 0 eh: 236 el: 1474
Max t: 32.916
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-16. Day 44-- of iteration 1 has ended. Population is e: 3649 i: 1094 a: 138 d: 0 eh: 229 el: 1805
Max t: 33.752
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-17. Day 45-- of iteration 1 has ended. Population is e: 4869 i: 1442 a: 150 d: 0 eh: 513 el: 2546
Max t: 31.605
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-18. Day 46-- of iteration 1 has ended. Population is e: 6536 i: 1973 a: 159 d: 0 eh: 702 el: 1734
Max t: 30.666
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-19. Day 47-- of iteration 1 has ended. Population is e: 4844 i: 1221 a: 115 d: 0 eh: 228 el: 1379
Max t: 37.596
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-20. Day 48-- of iteration 1 has ended. Population is e: 5015 i: 1419 a: 133 d: 0 eh: 551 el: 1818
Max t: 34.574
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-21. Day 49-- of iteration 1 has ended. Population is e: 5984 i: 2352 a: 136 d: 0 eh: 1070 el: 1933
Max t: 30.584
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-22. Day 50-- of iteration 1 has ended. Population is e: 6301 i: 3060 a: 127 d: 0 eh: 918 el: 1799
Max t: 31.858
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-23. Day 51-- of iteration 1 has ended. Population is e: 6714 i: 3885 a: 154 d: 1 eh: 1104 el: 1372
Max t: 30.56
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-24. Day 52-- of iteration 1 has ended. Population is e: 4401 i: 2204 a: 135 d: 0 eh: 231 el: 1113
Max t: 37.626
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-25. Day 53-- of iteration 1 has ended. Population is e: 4233 i: 2045 a: 149 d: 1 eh: 540 el: 1478
Max t: 35.659
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-26. Day 54-- of iteration 1 has ended. Population is e: 4796 i: 2600 a: 174 d: 0 eh: 879 el: 1813
Max t: 32.225
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-27. Day 55-- of iteration 1 has ended. Population is e: 5063 i: 2687 a: 210 d: 0 eh: 557 el: 2391
Max t: 33.831
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-28. Day 56-- of iteration 1 has ended. Population is e: 6409 i: 3085 a: 278 d: 1 eh: 795 el: 2585
Max t: 31.699
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-29. Day 57-- of iteration 1 has ended. Population is e: 7599 i: 3557 a: 341 d: 2 eh: 909 el: 3921
Max t: 31.456
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-30. Day 58-- of iteration 1 has ended. Population is e: 10057 i: 4319 a: 353 d: 4 eh: 1143 el: 4975
Max t: 30.678
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-31. Day 59-- of iteration 1 has ended. Population is e: 13058 i: 5349 a: 358 d: 6 eh: 1493 el: 4234
Max t: 30.967
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-08-01. Day 60-- of iteration 1 has ended. Population is e: 12238 i: 4537 a: 382 d: 3 eh: 777 el: 3227
Max t: 35.589
########################################
## Iterations concluded. ##
########################################
Warning: Using `size` aesthetic for lines was deprecated in ggplot2 3.4.0.
ℹ Please use `linewidth` instead.
--- finished re-building ‘dynamAedes_local.Rmd’
--- re-building ‘dynamAedes_punctual.Rmd’ using rmarkdown
Loading required package: spatstat
Loading required package: spatstat.data
Loading required package: spatstat.geom
spatstat.geom 3.0-3
Loading required package: spatstat.random
spatstat.random 3.0-1
Loading required package: spatstat.explore
Loading required package: nlme
spatstat.explore 3.0-5
Loading required package: spatstat.model
Loading required package: rpart
spatstat.model 3.0-2
Loading required package: spatstat.linnet
spatstat.linnet 3.0-3
spatstat 3.0-2
For an introduction to spatstat, type 'beginner'
Loading required package: sp
Loading required package: gstat
Attaching package: 'gstat'
The following object is masked from 'package:spatstat.explore':
idw
Loading required package: parallel
Loading required package: eesim
Loading required package: tidyverse
── Attaching packages ─────────────────────────────────────── tidyverse 1.3.2 ──
✔ ggplot2 3.4.0 ✔ purrr 0.3.5
✔ tibble 3.1.8 ✔ dplyr 1.0.10
✔ tidyr 1.2.1 ✔ stringr 1.4.1
✔ readr 2.1.3 ✔ forcats 0.5.2
── Conflicts ────────────────────────────────────────── tidyverse_conflicts() ──
✖ dplyr::collapse() masks nlme::collapse()
✖ dplyr::filter() masks stats::filter()
✖ dplyr::lag() masks stats::lag()
Loading required package: geosphere
Attaching package: 'geosphere'
The following object is masked from 'package:spatstat.geom':
perimeter
Loading required package: rgeos
rgeos version: 0.5-9, (SVN revision 684)
GEOS runtime version: 3.10.2-CAPI-1.16.0
Please note that rgeos will be retired by the end of 2023,
plan transition to sf functions using GEOS at your earliest convenience.
GEOS using OverlayNG
Linking to sp version: 1.5-1
Polygon checking: TRUE
Loading required package: dynamAedes
Loading required package: raster
Attaching package: 'raster'
The following object is masked from 'package:dplyr':
select
The following object is masked from 'package:nlme':
getData
Warning in max(cells.coords[, 2]) :
no non-missing arguments to max; returning -Inf
### Model without dispersal ###
starting worker pid=1403488 on localhost:11653 at 14:12:06.059
##########################################
## Life cycle iterations have begun... ##
##########################################
Loading required package: dynamAedes
Loading required package: raster
Loading required package: sp
loaded dynamAedes and set parent environment
|
|%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%| 100%
########################################
## Iterations concluded. ##
########################################
Warning: Using `size` aesthetic for lines was deprecated in ggplot2 3.4.0.
ℹ Please use `linewidth` instead.
--- finished re-building ‘dynamAedes_punctual.Rmd’
--- re-building ‘dynamAedes_regional.Rmd’ using rmarkdown
Loading required package: spatstat
Loading required package: spatstat.data
Loading required package: spatstat.geom
spatstat.geom 3.0-3
Loading required package: spatstat.random
spatstat.random 3.0-1
Loading required package: spatstat.explore
Loading required package: nlme
spatstat.explore 3.0-5
Loading required package: spatstat.model
Loading required package: rpart
spatstat.model 3.0-2
Loading required package: spatstat.linnet
spatstat.linnet 3.0-3
spatstat 3.0-2
For an introduction to spatstat, type 'beginner'
Loading required package: sp
Loading required package: gstat
Attaching package: 'gstat'
The following object is masked from 'package:spatstat.explore':
idw
Loading required package: parallel
Loading required package: eesim
Loading required package: tidyverse
── Attaching packages ─────────────────────────────────────── tidyverse 1.3.2 ──
✔ ggplot2 3.4.0 ✔ purrr 0.3.5
✔ tibble 3.1.8 ✔ dplyr 1.0.10
✔ tidyr 1.2.1 ✔ stringr 1.4.1
✔ readr 2.1.3 ✔ forcats 0.5.2
── Conflicts ────────────────────────────────────────── tidyverse_conflicts() ──
✖ dplyr::collapse() masks nlme::collapse()
✖ dplyr::filter() masks stats::filter()
✖ dplyr::lag() masks stats::lag()
Loading required package: geosphere
Attaching package: 'geosphere'
The following object is masked from 'package:spatstat.geom':
perimeter
Loading required package: rgeos
rgeos version: 0.5-9, (SVN revision 684)
GEOS runtime version: 3.10.2-CAPI-1.16.0
Please note that rgeos will be retired by the end of 2023,
plan transition to sf functions using GEOS at your earliest convenience.
GEOS using OverlayNG
Linking to sp version: 1.5-1
Polygon checking: TRUE
Loading required package: dynamAedes
Loading required package: raster
Attaching package: 'raster'
The following object is masked from 'package:dplyr':
select
The following object is masked from 'package:nlme':
getData
inside
Quitting from lines 182-196 (dynamAedes_regional.Rmd)
Error: processing vignette 'dynamAedes_regional.Rmd' failed with diagnostics:
error in evaluating the argument 'obj' in selecting a method for function 'coordinates': package rgdal is required for spTransform methods
--- failed re-building ‘dynamAedes_regional.Rmd’
SUMMARY: processing the following file failed:
‘dynamAedes_regional.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 2.1.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘dynamAedes_local.Rmd’ using rmarkdown
Loading required package: spatstat
Loading required package: spatstat.data
Loading required package: spatstat.geom
spatstat.geom 3.0-3
Loading required package: spatstat.random
spatstat.random 3.0-1
Loading required package: spatstat.explore
Loading required package: nlme
spatstat.explore 3.0-5
Loading required package: spatstat.model
Loading required package: rpart
spatstat.model 3.0-2
Loading required package: spatstat.linnet
spatstat.linnet 3.0-2
spatstat 3.0-2
For an introduction to spatstat, type 'beginner'
Loading required package: sp
Loading required package: gstat
Attaching package: 'gstat'
The following object is masked from 'package:spatstat.explore':
idw
Loading required package: parallel
Loading required package: eesim
Loading required package: tidyverse
── Attaching packages ─────────────────────────────────────── tidyverse 1.3.2 ──
✔ ggplot2 3.4.0 ✔ purrr 0.3.5
✔ tibble 3.1.8 ✔ dplyr 1.0.10
✔ tidyr 1.2.1 ✔ stringr 1.4.1
✔ readr 2.1.3 ✔ forcats 0.5.2
── Conflicts ────────────────────────────────────────── tidyverse_conflicts() ──
✖ dplyr::collapse() masks nlme::collapse()
✖ dplyr::filter() masks stats::filter()
✖ dplyr::lag() masks stats::lag()
Loading required package: geosphere
Attaching package: 'geosphere'
The following object is masked from 'package:spatstat.geom':
perimeter
Loading required package: rgeos
rgeos version: 0.5-9, (SVN revision 684)
GEOS runtime version: 3.11.0-CAPI-1.17.0
Please note that rgeos will be retired by the end of 2023,
plan transition to sf functions using GEOS at your earliest convenience.
GEOS using OverlayNG
Linking to sp version: 1.5-1
Polygon checking: TRUE
Loading required package: dynamAedes
Loading required package: raster
Attaching package: 'raster'
The following object is masked from 'package:dplyr':
select
The following object is masked from 'package:nlme':
getData
starting worker pid=4126614 on localhost:11885 at 03:43:57.529
##########################################
## Life cycle iterations have begun... ##
##########################################
Loading required package: dynamAedes
Loading required package: raster
Loading required package: sp
loaded dynamAedes and set parent environment
|
|%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%| 100%[1] "No active dispersing females today..."
2000-06-03. Day 1-- of iteration 1 has ended. Population is e: 0 i: 0 a: 4642 d: 0 eh: 0 el: 96449
Max t: 28.528
[1] "No active dispersing females today..."
2000-06-04. Day 2-- of iteration 1 has ended. Population is e: 96449 i: 0 a: 908 d: 0 eh: 0 el: 87670
Max t: 33.067
2000-06-05. Day 3-- of iteration 1 has ended. Population is e: 145164 i: 0 a: 667 d: 0 eh: 0 el: 0
Max t: 33.176
[1] "No active dispersing females today..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-06. Day 4-- of iteration 1 has ended. Population is e: 97611 i: 0 a: 552 d: 0 eh: 0 el: 11607
Max t: 32.396
[1] "No active dispersing females today..."
2000-06-07. Day 5-- of iteration 1 has ended. Population is e: 94504 i: 16925 a: 127 d: 0 eh: 16925 el: 10194
Max t: 29.701
2000-06-08. Day 6-- of iteration 1 has ended. Population is e: 70933 i: 33194 a: 103 d: 0 eh: 19439 el: 0
Max t: 31.715
[1] "No active dispersing females today..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-09. Day 7-- of iteration 1 has ended. Population is e: 46352 i: 40022 a: 89 d: 0 eh: 12608 el: 2422
Max t: 31.506
[1] "No active dispersing females today..."
2000-06-10. Day 8-- of iteration 1 has ended. Population is e: 30106 i: 31075 a: 18 d: 0 eh: 5828 el: 2011
Max t: 33.415
2000-06-11. Day 9-- of iteration 1 has ended. Population is e: 24281 i: 33299 a: 17 d: 0 eh: 7840 el: 0
Max t: 31.558
[1] "No active dispersing females today..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-12. Day 10-- of iteration 1 has ended. Population is e: 14300 i: 17808 a: 4 d: 0 eh: 2164 el: 325
Max t: 34.528
[1] "No active dispersing females today..."
2000-06-13. Day 11-- of iteration 1 has ended. Population is e: 11892 i: 16686 a: 619 d: 0 eh: 4002 el: 155
Max t: 31.783
2000-06-14. Day 12-- of iteration 1 has ended. Population is e: 7396 i: 7958 a: 875 d: 0 eh: 1039 el: 0
Max t: 34.908
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-15. Day 13-- of iteration 1 has ended. Population is e: 6247 i: 8047 a: 1405 d: 0 eh: 2733 el: 6817
Max t: 30.567
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-16. Day 14-- of iteration 1 has ended. Population is e: 10264 i: 8226 a: 1331 d: 0 eh: 1545 el: 14118
Max t: 30.22
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-17. Day 15-- of iteration 1 has ended. Population is e: 16134 i: 708 a: 60 d: 0 eh: 1 el: 0
Max t: 39.83
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-18. Day 16-- of iteration 1 has ended. Population is e: 11704 i: 671 a: 46 d: 0 eh: 603 el: 359
Max t: 32.185
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-19. Day 17-- of iteration 1 has ended. Population is e: 6882 i: 689 a: 34 d: 0 eh: 274 el: 1119
Max t: 33.781
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-20. Day 18-- of iteration 1 has ended. Population is e: 4759 i: 952 a: 22 d: 0 eh: 644 el: 810
Max t: 34.575
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-21. Day 19-- of iteration 1 has ended. Population is e: 4628 i: 1678 a: 20 d: 0 eh: 938 el: 319
Max t: 32.281
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-22. Day 20-- of iteration 1 has ended. Population is e: 3330 i: 1179 a: 17 d: 0 eh: 358 el: 326
Max t: 34.466
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-23. Day 21-- of iteration 1 has ended. Population is e: 2893 i: 1159 a: 6 d: 0 eh: 480 el: 151
Max t: 34.218
[1] "No active dispersing females today..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-24. Day 22-- of iteration 1 has ended. Population is e: 2354 i: 1431 a: 13 d: 0 eh: 604 el: 84
Max t: 33.042
2000-06-25. Day 23-- of iteration 1 has ended. Population is e: 1676 i: 1345 a: 14 d: 0 eh: 345 el: 0
Max t: 33.69
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-26. Day 24-- of iteration 1 has ended. Population is e: 1241 i: 1295 a: 29 d: 0 eh: 356 el: 364
Max t: 33.53
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-27. Day 25-- of iteration 1 has ended. Population is e: 1145 i: 385 a: 14 d: 0 eh: 21 el: 103
Max t: 38.147
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-28. Day 26-- of iteration 1 has ended. Population is e: 1114 i: 585 a: 25 d: 0 eh: 290 el: 132
Max t: 32.12
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-29. Day 27-- of iteration 1 has ended. Population is e: 901 i: 709 a: 38 d: 0 eh: 214 el: 229
Max t: 31.405
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-30. Day 28-- of iteration 1 has ended. Population is e: 782 i: 596 a: 50 d: 0 eh: 117 el: 804
Max t: 33.832
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-01. Day 29-- of iteration 1 has ended. Population is e: 1322 i: 449 a: 65 d: 0 eh: 80 el: 813
Max t: 34.434
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-02. Day 30-- of iteration 1 has ended. Population is e: 1740 i: 342 a: 70 d: 1 eh: 56 el: 779
Max t: 34.72
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-03. Day 31-- of iteration 1 has ended. Population is e: 2239 i: 385 a: 68 d: 0 eh: 115 el: 1045
Max t: 32.843
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-04. Day 32-- of iteration 1 has ended. Population is e: 2942 i: 641 a: 63 d: 0 eh: 325 el: 745
Max t: 31.574
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-05. Day 33-- of iteration 1 has ended. Population is e: 2386 i: 505 a: 49 d: 0 eh: 159 el: 571
Max t: 36.498
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-06. Day 34-- of iteration 1 has ended. Population is e: 2465 i: 785 a: 44 d: 0 eh: 365 el: 484
Max t: 33.088
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-07. Day 35-- of iteration 1 has ended. Population is e: 2370 i: 1136 a: 42 d: 0 eh: 444 el: 637
Max t: 31.992
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-08. Day 36-- of iteration 1 has ended. Population is e: 2255 i: 1343 a: 26 d: 0 eh: 368 el: 612
Max t: 33.313
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-09. Day 37-- of iteration 1 has ended. Population is e: 2215 i: 1489 a: 27 d: 0 eh: 351 el: 548
Max t: 33.38
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-10. Day 38-- of iteration 1 has ended. Population is e: 1857 i: 1141 a: 38 d: 0 eh: 158 el: 388
Max t: 36.124
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-11. Day 39-- of iteration 1 has ended. Population is e: 1791 i: 1216 a: 63 d: 0 eh: 289 el: 345
Max t: 33.931
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-12. Day 40-- of iteration 1 has ended. Population is e: 1505 i: 1025 a: 84 d: 0 eh: 203 el: 503
Max t: 35.316
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-13. Day 41-- of iteration 1 has ended. Population is e: 1632 i: 1103 a: 120 d: 0 eh: 303 el: 1032
Max t: 32.632
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-14. Day 42-- of iteration 1 has ended. Population is e: 2116 i: 1041 a: 142 d: 0 eh: 184 el: 1204
Max t: 34.101
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-15. Day 43-- of iteration 1 has ended. Population is e: 2862 i: 1071 a: 145 d: 0 eh: 236 el: 1474
Max t: 32.916
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-16. Day 44-- of iteration 1 has ended. Population is e: 3649 i: 1094 a: 138 d: 0 eh: 229 el: 1805
Max t: 33.752
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-17. Day 45-- of iteration 1 has ended. Population is e: 4869 i: 1442 a: 150 d: 0 eh: 513 el: 2546
Max t: 31.605
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-18. Day 46-- of iteration 1 has ended. Population is e: 6536 i: 1973 a: 159 d: 0 eh: 702 el: 1734
Max t: 30.666
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-19. Day 47-- of iteration 1 has ended. Population is e: 4844 i: 1221 a: 115 d: 0 eh: 228 el: 1379
Max t: 37.596
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-20. Day 48-- of iteration 1 has ended. Population is e: 5015 i: 1419 a: 133 d: 0 eh: 551 el: 1818
Max t: 34.574
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-21. Day 49-- of iteration 1 has ended. Population is e: 5984 i: 2352 a: 136 d: 0 eh: 1070 el: 1933
Max t: 30.584
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-22. Day 50-- of iteration 1 has ended. Population is e: 6301 i: 3060 a: 127 d: 0 eh: 918 el: 1799
Max t: 31.858
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-23. Day 51-- of iteration 1 has ended. Population is e: 6714 i: 3885 a: 154 d: 1 eh: 1104 el: 1372
Max t: 30.56
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-24. Day 52-- of iteration 1 has ended. Population is e: 4401 i: 2204 a: 135 d: 0 eh: 231 el: 1113
Max t: 37.626
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-25. Day 53-- of iteration 1 has ended. Population is e: 4233 i: 2045 a: 149 d: 1 eh: 540 el: 1478
Max t: 35.659
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-26. Day 54-- of iteration 1 has ended. Population is e: 4796 i: 2600 a: 174 d: 0 eh: 879 el: 1813
Max t: 32.225
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-27. Day 55-- of iteration 1 has ended. Population is e: 5063 i: 2687 a: 210 d: 0 eh: 557 el: 2391
Max t: 33.831
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-28. Day 56-- of iteration 1 has ended. Population is e: 6409 i: 3085 a: 278 d: 1 eh: 795 el: 2585
Max t: 31.699
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-29. Day 57-- of iteration 1 has ended. Population is e: 7599 i: 3557 a: 341 d: 2 eh: 909 el: 3921
Max t: 31.456
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-30. Day 58-- of iteration 1 has ended. Population is e: 10057 i: 4319 a: 353 d: 4 eh: 1143 el: 4975
Max t: 30.678
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-31. Day 59-- of iteration 1 has ended. Population is e: 13058 i: 5349 a: 358 d: 6 eh: 1493 el: 4234
Max t: 30.967
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-08-01. Day 60-- of iteration 1 has ended. Population is e: 12238 i: 4537 a: 382 d: 3 eh: 777 el: 3227
Max t: 35.589
########################################
## Iterations concluded. ##
########################################
Warning: Using `size` aesthetic for lines was deprecated in ggplot2 3.4.0.
ℹ Please use `linewidth` instead.
--- finished re-building ‘dynamAedes_local.Rmd’
--- re-building ‘dynamAedes_punctual.Rmd’ using rmarkdown
Loading required package: spatstat
Loading required package: spatstat.data
Loading required package: spatstat.geom
spatstat.geom 3.0-3
Loading required package: spatstat.random
spatstat.random 3.0-1
Loading required package: spatstat.explore
Loading required package: nlme
spatstat.explore 3.0-5
Loading required package: spatstat.model
Loading required package: rpart
spatstat.model 3.0-2
Loading required package: spatstat.linnet
spatstat.linnet 3.0-2
spatstat 3.0-2
For an introduction to spatstat, type 'beginner'
Loading required package: sp
Loading required package: gstat
Attaching package: 'gstat'
The following object is masked from 'package:spatstat.explore':
idw
Loading required package: parallel
Loading required package: eesim
Loading required package: tidyverse
── Attaching packages ─────────────────────────────────────── tidyverse 1.3.2 ──
✔ ggplot2 3.4.0 ✔ purrr 0.3.5
✔ tibble 3.1.8 ✔ dplyr 1.0.10
✔ tidyr 1.2.1 ✔ stringr 1.4.1
✔ readr 2.1.3 ✔ forcats 0.5.2
── Conflicts ────────────────────────────────────────── tidyverse_conflicts() ──
✖ dplyr::collapse() masks nlme::collapse()
✖ dplyr::filter() masks stats::filter()
✖ dplyr::lag() masks stats::lag()
Loading required package: geosphere
Attaching package: 'geosphere'
The following object is masked from 'package:spatstat.geom':
perimeter
Loading required package: rgeos
rgeos version: 0.5-9, (SVN revision 684)
GEOS runtime version: 3.11.0-CAPI-1.17.0
Please note that rgeos will be retired by the end of 2023,
plan transition to sf functions using GEOS at your earliest convenience.
GEOS using OverlayNG
Linking to sp version: 1.5-1
Polygon checking: TRUE
Loading required package: dynamAedes
Loading required package: raster
Attaching package: 'raster'
The following object is masked from 'package:dplyr':
select
The following object is masked from 'package:nlme':
getData
Warning in max(cells.coords[, 2]) :
no non-missing arguments to max; returning -Inf
### Model without dispersal ###
starting worker pid=4157500 on localhost:11005 at 03:46:17.376
##########################################
## Life cycle iterations have begun... ##
##########################################
Loading required package: dynamAedes
Loading required package: raster
Loading required package: sp
loaded dynamAedes and set parent environment
|
|%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%| 100%
########################################
## Iterations concluded. ##
########################################
Warning: Using `size` aesthetic for lines was deprecated in ggplot2 3.4.0.
ℹ Please use `linewidth` instead.
--- finished re-building ‘dynamAedes_punctual.Rmd’
--- re-building ‘dynamAedes_regional.Rmd’ using rmarkdown
Loading required package: spatstat
Loading required package: spatstat.data
Loading required package: spatstat.geom
spatstat.geom 3.0-3
Loading required package: spatstat.random
spatstat.random 3.0-1
Loading required package: spatstat.explore
Loading required package: nlme
spatstat.explore 3.0-5
Loading required package: spatstat.model
Loading required package: rpart
spatstat.model 3.0-2
Loading required package: spatstat.linnet
spatstat.linnet 3.0-2
spatstat 3.0-2
For an introduction to spatstat, type 'beginner'
Loading required package: sp
Loading required package: gstat
Attaching package: 'gstat'
The following object is masked from 'package:spatstat.explore':
idw
Loading required package: parallel
Loading required package: eesim
Loading required package: tidyverse
── Attaching packages ─────────────────────────────────────── tidyverse 1.3.2 ──
✔ ggplot2 3.4.0 ✔ purrr 0.3.5
✔ tibble 3.1.8 ✔ dplyr 1.0.10
✔ tidyr 1.2.1 ✔ stringr 1.4.1
✔ readr 2.1.3 ✔ forcats 0.5.2
── Conflicts ────────────────────────────────────────── tidyverse_conflicts() ──
✖ dplyr::collapse() masks nlme::collapse()
✖ dplyr::filter() masks stats::filter()
✖ dplyr::lag() masks stats::lag()
Loading required package: geosphere
Attaching package: 'geosphere'
The following object is masked from 'package:spatstat.geom':
perimeter
Loading required package: rgeos
rgeos version: 0.5-9, (SVN revision 684)
GEOS runtime version: 3.11.0-CAPI-1.17.0
Please note that rgeos will be retired by the end of 2023,
plan transition to sf functions using GEOS at your earliest convenience.
GEOS using OverlayNG
Linking to sp version: 1.5-1
Polygon checking: TRUE
Loading required package: dynamAedes
Loading required package: raster
Attaching package: 'raster'
The following object is masked from 'package:dplyr':
select
The following object is masked from 'package:nlme':
getData
inside
Quitting from lines 182-196 (dynamAedes_regional.Rmd)
Error: processing vignette ‘dynamAedes_regional.Rmd’ failed with diagnostics:
error in evaluating the argument ‘obj’ in selecting a method for function ‘coordinates’: package rgdal is required for spTransform methods
--- failed re-building ‘dynamAedes_regional.Rmd’
SUMMARY: processing the following file failed:
‘dynamAedes_regional.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-patched-linux-x86_64
Version: 2.1.0
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
--- re-building 'dynamAedes_local.Rmd' using rmarkdown
Loading required package: spatstat
Loading required package: spatstat.data
Loading required package: spatstat.geom
spatstat.geom 3.0-3
Loading required package: spatstat.random
spatstat.random 3.0-1
Loading required package: spatstat.explore
Loading required package: nlme
spatstat.explore 3.0-5
Loading required package: spatstat.model
Loading required package: rpart
spatstat.model 3.0-2
Loading required package: spatstat.linnet
spatstat.linnet 3.0-3
spatstat 3.0-2
For an introduction to spatstat, type 'beginner'
Loading required package: sp
Loading required package: gstat
Attaching package: 'gstat'
The following object is masked from 'package:spatstat.explore':
idw
Loading required package: parallel
Loading required package: eesim
Loading required package: tidyverse
-- Attaching packages --------------------------------------- tidyverse 1.3.2 --
v ggplot2 3.4.0 v purrr 0.3.5
v tibble 3.1.8 v dplyr 1.0.10
v tidyr 1.2.1 v stringr 1.4.1
v readr 2.1.3 v forcats 0.5.2
-- Conflicts ------------------------------------------ tidyverse_conflicts() --
x dplyr::collapse() masks nlme::collapse()
x dplyr::filter() masks stats::filter()
x dplyr::lag() masks stats::lag()
Loading required package: geosphere
Attaching package: 'geosphere'
The following object is masked from 'package:spatstat.geom':
perimeter
Loading required package: rgeos
rgeos version: 0.5-9, (SVN revision 684)
GEOS runtime version: 3.9.1-CAPI-1.14.2
Please note that rgeos will be retired by the end of 2023,
plan transition to sf functions using GEOS at your earliest convenience.
GEOS using OverlayNG
Linking to sp version: 1.5-1
Polygon checking: TRUE
Loading required package: dynamAedes
Loading required package: raster
Attaching package: 'raster'
The following object is masked from 'package:dplyr':
select
The following object is masked from 'package:nlme':
getData
Warning in Sys.setlocale("LC_TIME", "en_GB.UTF-8") :
OS reports request to set locale to "en_GB.UTF-8" cannot be honored
starting worker pid=52468 on localhost:11015 at 23:24:41.636
##########################################
## Life cycle iterations have begun... ##
##########################################
Loading required package: dynamAedes
Loading required package: raster
Loading required package: sp
loaded dynamAedes and set parent environment
|
|%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%| 100%[1] "No active dispersing females today..."
2000-06-03. Day 1-- of iteration 1 has ended. Population is e: 0 i: 0 a: 4685 d: 0 eh: 0 el: 81273
Max t: 28.715
[1] "No active dispersing females today..."
2000-06-04. Day 2-- of iteration 1 has ended. Population is e: 81273 i: 0 a: 1018 d: 0 eh: 0 el: 82818
Max t: 33.284
2000-06-05. Day 3-- of iteration 1 has ended. Population is e: 149025 i: 0 a: 921 d: 0 eh: 0 el: 0
Max t: 33.393
[1] "No active dispersing females today..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-06. Day 4-- of iteration 1 has ended. Population is e: 126797 i: 0 a: 822 d: 0 eh: 0 el: 17933
Max t: 32.608
[1] "No active dispersing females today..."
2000-06-07. Day 5-- of iteration 1 has ended. Population is e: 134900 i: 34243 a: 205 d: 0 eh: 34243 el: 15219
Max t: 29.895
2000-06-08. Day 6-- of iteration 1 has ended. Population is e: 105320 i: 73329 a: 191 d: 0 eh: 41490 el: 0
Max t: 31.923
[1] "No active dispersing females today..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-09. Day 7-- of iteration 1 has ended. Population is e: 59842 i: 86636 a: 179 d: 0 eh: 18496 el: 4130
Max t: 31.712
[1] "No active dispersing females today..."
2000-06-10. Day 8-- of iteration 1 has ended. Population is e: 39930 i: 86302 a: 47 d: 0 eh: 11235 el: 4039
Max t: 33.633
2000-06-11. Day 9-- of iteration 1 has ended. Population is e: 30803 i: 92515 a: 44 d: 0 eh: 13042 el: 0
Max t: 31.765
[1] "No active dispersing females today..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-12. Day 10-- of iteration 1 has ended. Population is e: 15549 i: 77882 a: 40 d: 0 eh: 3693 el: 576
Max t: 34.754
[1] "No active dispersing females today..."
2000-06-13. Day 11-- of iteration 1 has ended. Population is e: 11648 i: 65559 a: 4821 d: 0 eh: 4670 el: 598
Max t: 31.991
2000-06-14. Day 12-- of iteration 1 has ended. Population is e: 6595 i: 43776 a: 10007 d: 0 eh: 1933 el: 0
Max t: 35.137
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-15. Day 13-- of iteration 1 has ended. Population is e: 4531 i: 30188 a: 15057 d: 0 eh: 2197 el: 76884
Max t: 30.768
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-16. Day 14-- of iteration 1 has ended. Population is e: 79122 i: 23668 a: 14491 d: 0 eh: 1127 el: 169668
Max t: 30.417
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-17. Day 15-- of iteration 1 has ended. Population is e: 189231 i: 8903 a: 4133 d: 0 eh: 32 el: 0
Max t: 40.091
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-18. Day 16-- of iteration 1 has ended. Population is e: 162171 i: 2507 a: 4446 d: 0 eh: 364 el: 48560
Max t: 32.396
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-19. Day 17-- of iteration 1 has ended. Population is e: 174837 i: 7107 a: 3469 d: 0 eh: 5472 el: 45642
Max t: 34.002
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-20. Day 18-- of iteration 1 has ended. Population is e: 171236 i: 38957 a: 2485 d: 0 eh: 33582 el: 57206
Max t: 34.802
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-21. Day 19-- of iteration 1 has ended. Population is e: 182379 i: 64484 a: 1359 d: 0 eh: 29059 el: 41866
Max t: 32.492
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-22. Day 20-- of iteration 1 has ended. Population is e: 161522 i: 70916 a: 931 d: 0 eh: 18602 el: 16652
Max t: 34.692
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-23. Day 21-- of iteration 1 has ended. Population is e: 131231 i: 78994 a: 633 d: 0 eh: 20611 el: 15346
Max t: 34.442
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-24. Day 22-- of iteration 1 has ended. Population is e: 111387 i: 96417 a: 396 d: 0 eh: 26713 el: 11433
Max t: 33.259
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-25. Day 23-- of iteration 1 has ended. Population is e: 84051 i: 102663 a: 865 d: 0 eh: 21427 el: 4365
Max t: 33.911
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-26. Day 24-- of iteration 1 has ended. Population is e: 59799 i: 96410 a: 4600 d: 0 eh: 16048 el: 4918
Max t: 33.75
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-27. Day 25-- of iteration 1 has ended. Population is e: 34764 i: 42765 a: 5009 d: 0 eh: 3570 el: 10282
Max t: 38.397
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-28. Day 26-- of iteration 1 has ended. Population is e: 39789 i: 43109 a: 7575 d: 0 eh: 12627 el: 43531
Max t: 32.33
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-29. Day 27-- of iteration 1 has ended. Population is e: 68733 i: 43747 a: 7360 d: 2 eh: 7006 el: 86596
Max t: 31.611
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-06-30. Day 28-- of iteration 1 has ended. Population is e: 135854 i: 37006 a: 7090 d: 2 eh: 3398 el: 105101
Max t: 34.054
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-01. Day 29-- of iteration 1 has ended. Population is e: 204125 i: 29586 a: 6875 d: 4 eh: 3830 el: 89417
Max t: 34.659
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-02. Day 30-- of iteration 1 has ended. Population is e: 235346 i: 28920 a: 6593 d: 4 eh: 8752 el: 81862
Max t: 34.948
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-03. Day 31-- of iteration 1 has ended. Population is e: 272535 i: 49332 a: 5896 d: 2 eh: 25924 el: 94826
Max t: 33.058
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-04. Day 32-- of iteration 1 has ended. Population is e: 314737 i: 88307 a: 5746 d: 4 eh: 46195 el: 84530
Max t: 31.781
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-05. Day 33-- of iteration 1 has ended. Population is e: 253966 i: 72224 a: 4223 d: 5 eh: 18319 el: 61900
Max t: 36.737
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-06. Day 34-- of iteration 1 has ended. Population is e: 264112 i: 102777 a: 4194 d: 4 eh: 41494 el: 55297
Max t: 33.305
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-07. Day 35-- of iteration 1 has ended. Population is e: 253650 i: 138509 a: 3452 d: 2 eh: 45733 el: 59388
Max t: 32.202
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-08. Day 36-- of iteration 1 has ended. Population is e: 234773 i: 158126 a: 3344 d: 2 eh: 39930 el: 52118
Max t: 33.531
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-09. Day 37-- of iteration 1 has ended. Population is e: 217562 i: 166657 a: 5269 d: 1 eh: 36801 el: 42895
Max t: 33.599
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-10. Day 38-- of iteration 1 has ended. Population is e: 169538 i: 121351 a: 7795 d: 5 eh: 18112 el: 37627
Max t: 36.36
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-11. Day 39-- of iteration 1 has ended. Population is e: 164947 i: 121644 a: 10371 d: 1 eh: 29459 el: 63040
Max t: 34.154
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-12. Day 40-- of iteration 1 has ended. Population is e: 167328 i: 100956 a: 11438 d: 3 eh: 18419 el: 118007
Max t: 35.548
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-13. Day 41-- of iteration 1 has ended. Population is e: 248801 i: 106258 a: 13714 d: 7 eh: 28068 el: 132869
Max t: 32.845
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-14. Day 42-- of iteration 1 has ended. Population is e: 307287 i: 98798 a: 14252 d: 7 eh: 18020 el: 153787
Max t: 34.324
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-15. Day 43-- of iteration 1 has ended. Population is e: 397499 i: 106108 a: 15246 d: 14 eh: 28497 el: 185989
Max t: 33.131
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-16. Day 44-- of iteration 1 has ended. Population is e: 481757 i: 122061 a: 13635 d: 11 eh: 38186 el: 191836
Max t: 33.973
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-17. Day 45-- of iteration 1 has ended. Population is e: 587334 i: 173055 a: 14512 d: 15 eh: 70520 el: 181353
Max t: 31.812
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-18. Day 46-- of iteration 1 has ended. Population is e: 653337 i: 245466 a: 14168 d: 13 eh: 92303 el: 170082
Max t: 30.867
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-19. Day 47-- of iteration 1 has ended. Population is e: 462448 i: 139170 a: 9737 d: 13 eh: 22893 el: 141842
Max t: 37.842
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-20. Day 48-- of iteration 1 has ended. Population is e: 490218 i: 161352 a: 10194 d: 15 eh: 61039 el: 110404
Max t: 34.8
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-21. Day 49-- of iteration 1 has ended. Population is e: 507656 i: 239929 a: 10728 d: 17 eh: 96370 el: 108369
Max t: 30.784
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-22. Day 50-- of iteration 1 has ended. Population is e: 472963 i: 295772 a: 11312 d: 16 eh: 85783 el: 141696
Max t: 32.067
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-23. Day 51-- of iteration 1 has ended. Population is e: 498698 i: 358655 a: 14371 d: 22 eh: 106309 el: 136692
Max t: 30.76
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-24. Day 52-- of iteration 1 has ended. Population is e: 353565 i: 179910 a: 12390 d: 21 eh: 18545 el: 107815
Max t: 37.873
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-25. Day 53-- of iteration 1 has ended. Population is e: 354577 i: 147485 a: 13784 d: 12 eh: 34812 el: 122981
Max t: 35.892
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-26. Day 54-- of iteration 1 has ended. Population is e: 407723 i: 182436 a: 15306 d: 24 eh: 61065 el: 156627
Max t: 32.436
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-27. Day 55-- of iteration 1 has ended. Population is e: 438339 i: 190279 a: 16985 d: 31 eh: 47995 el: 193991
Max t: 34.053
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-28. Day 56-- of iteration 1 has ended. Population is e: 543037 i: 227426 a: 19942 d: 49 eh: 70929 el: 192626
Max t: 31.907
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-29. Day 57-- of iteration 1 has ended. Population is e: 615673 i: 264896 a: 23324 d: 81 eh: 74741 el: 216932
Max t: 31.662
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-30. Day 58-- of iteration 1 has ended. Population is e: 710603 i: 329299 a: 22964 d: 103 eh: 100380 el: 276302
Max t: 30.879
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-07-31. Day 59-- of iteration 1 has ended. Population is e: 829595 i: 400039 a: 22999 d: 152 eh: 120889 el: 311595
Max t: 31.17
[1] "Laying diapausing eggs"
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
[1] "Passively dispersing females stay in the cell of origin. Jumping to the next cell of origin..."
2000-08-01. Day 60-- of iteration 1 has ended. Population is e: 802256 i: 312157 a: 22243 d: 138 eh: 56318 el: 271448
Max t: 35.822
########################################
## Iterations concluded. ##
########################################
Warning: Using `size` aesthetic for lines was deprecated in ggplot2 3.4.0.
i Please use `linewidth` instead.
--- finished re-building 'dynamAedes_local.Rmd'
--- re-building 'dynamAedes_punctual.Rmd' using rmarkdown
Loading required package: spatstat
Loading required package: spatstat.data
Loading required package: spatstat.geom
spatstat.geom 3.0-3
Loading required package: spatstat.random
spatstat.random 3.0-1
Loading required package: spatstat.explore
Loading required package: nlme
spatstat.explore 3.0-5
Loading required package: spatstat.model
Loading required package: rpart
spatstat.model 3.0-2
Loading required package: spatstat.linnet
spatstat.linnet 3.0-3
spatstat 3.0-2
For an introduction to spatstat, type 'beginner'
Loading required package: sp
Loading required package: gstat
Attaching package: 'gstat'
The following object is masked from 'package:spatstat.explore':
idw
Loading required package: parallel
Loading required package: eesim
Loading required package: tidyverse
-- Attaching packages --------------------------------------- tidyverse 1.3.2 --
v ggplot2 3.4.0 v purrr 0.3.5
v tibble 3.1.8 v dplyr 1.0.10
v tidyr 1.2.1 v stringr 1.4.1
v readr 2.1.3 v forcats 0.5.2
-- Conflicts ------------------------------------------ tidyverse_conflicts() --
x dplyr::collapse() masks nlme::collapse()
x dplyr::filter() masks stats::filter()
x dplyr::lag() masks stats::lag()
Loading required package: geosphere
Attaching package: 'geosphere'
The following object is masked from 'package:spatstat.geom':
perimeter
Loading required package: rgeos
rgeos version: 0.5-9, (SVN revision 684)
GEOS runtime version: 3.9.1-CAPI-1.14.2
Please note that rgeos will be retired by the end of 2023,
plan transition to sf functions using GEOS at your earliest convenience.
GEOS using OverlayNG
Linking to sp version: 1.5-1
Polygon checking: TRUE
Loading required package: dynamAedes
Loading required package: raster
Attaching package: 'raster'
The following object is masked from 'package:dplyr':
select
The following object is masked from 'package:nlme':
getData
Warning in Sys.setlocale("LC_TIME", "en_GB.UTF-8") :
OS reports request to set locale to "en_GB.UTF-8" cannot be honored
Warning in max(cells.coords[, 2]) :
no non-missing arguments to max; returning -Inf
### Model without dispersal ###
starting worker pid=63388 on localhost:11785 at 23:26:50.352
##########################################
## Life cycle iterations have begun... ##
##########################################
Loading required package: dynamAedes
Loading required package: raster
Loading required package: sp
loaded dynamAedes and set parent environment
|
|%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%| 100%
########################################
## Iterations concluded. ##
########################################
Warning: Using `size` aesthetic for lines was deprecated in ggplot2 3.4.0.
i Please use `linewidth` instead.
--- finished re-building 'dynamAedes_punctual.Rmd'
--- re-building 'dynamAedes_regional.Rmd' using rmarkdown
Loading required package: spatstat
Loading required package: spatstat.data
Loading required package: spatstat.geom
spatstat.geom 3.0-3
Loading required package: spatstat.random
spatstat.random 3.0-1
Loading required package: spatstat.explore
Loading required package: nlme
spatstat.explore 3.0-5
Loading required package: spatstat.model
Loading required package: rpart
spatstat.model 3.0-2
Loading required package: spatstat.linnet
spatstat.linnet 3.0-3
spatstat 3.0-2
For an introduction to spatstat, type 'beginner'
Loading required package: sp
Loading required package: gstat
Attaching package: 'gstat'
The following object is masked from 'package:spatstat.explore':
idw
Loading required package: parallel
Loading required package: eesim
Loading required package: tidyverse
-- Attaching packages --------------------------------------- tidyverse 1.3.2 --
v ggplot2 3.4.0 v purrr 0.3.5
v tibble 3.1.8 v dplyr 1.0.10
v tidyr 1.2.1 v stringr 1.4.1
v readr 2.1.3 v forcats 0.5.2
-- Conflicts ------------------------------------------ tidyverse_conflicts() --
x dplyr::collapse() masks nlme::collapse()
x dplyr::filter() masks stats::filter()
x dplyr::lag() masks stats::lag()
Loading required package: geosphere
Attaching package: 'geosphere'
The following object is masked from 'package:spatstat.geom':
perimeter
Loading required package: rgeos
rgeos version: 0.5-9, (SVN revision 684)
GEOS runtime version: 3.9.1-CAPI-1.14.2
Please note that rgeos will be retired by the end of 2023,
plan transition to sf functions using GEOS at your earliest convenience.
GEOS using OverlayNG
Linking to sp version: 1.5-1
Polygon checking: TRUE
Loading required package: dynamAedes
Loading required package: raster
Attaching package: 'raster'
The following object is masked from 'package:dplyr':
select
The following object is masked from 'package:nlme':
getData
Warning in Sys.setlocale("LC_TIME", "en_GB.UTF-8") :
OS reports request to set locale to "en_GB.UTF-8" cannot be honored
inside
Quitting from lines 182-196 (dynamAedes_regional.Rmd)
Error: processing vignette 'dynamAedes_regional.Rmd' failed with diagnostics:
error in evaluating the argument 'obj' in selecting a method for function 'coordinates': package rgdal is required for spTransform methods
--- failed re-building 'dynamAedes_regional.Rmd'
SUMMARY: processing the following file failed:
'dynamAedes_regional.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-oldrel-windows-ix86+x86_64