Last updated on 2022-11-23 07:54:14 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.2 | 19.21 | 202.76 | 221.97 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 1.2 | 14.31 | 111.63 | 125.94 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.2 | 230.01 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 1.2 | 203.13 | ERROR | |||
| r-devel-windows-x86_64 | 1.2 | 29.00 | 167.00 | 196.00 | ERROR | |
| r-patched-linux-x86_64 | 1.2 | 14.77 | 136.82 | 151.59 | ERROR | |
| r-release-linux-x86_64 | 1.2 | 14.15 | 135.45 | 149.60 | ERROR | |
| r-release-macos-arm64 | 1.2 | 58.00 | OK | |||
| r-release-macos-x86_64 | 1.2 | 101.00 | OK | |||
| r-release-windows-x86_64 | 1.2 | 33.00 | 169.00 | 202.00 | ERROR | |
| r-oldrel-macos-arm64 | 1.2 | 56.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.2 | 82.00 | OK | |||
| r-oldrel-windows-ix86+x86_64 | 1.2 | 36.00 | 158.00 | 194.00 | ERROR |
Version: 1.2
Check: Rd files
Result: NOTE
checkRd: (-1) findRes.Rd:28: Escaped LaTeX specials: \&
checkRd: (-1) ppmlasso-package.Rd:42: Escaped LaTeX specials: \&
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64
Version: 1.2
Check: examples
Result: ERROR
Running examples in ‘ppmlasso-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: envelope.ppmlasso
> ### Title: Calculates simulation envelopes for goodness-of-fit
> ### Aliases: envelope.ppmlasso
>
> ### ** Examples
>
> data(BlueMountains)
> sub.env = BlueMountains$env[BlueMountains$env$Y > 6270 & BlueMountains$env$X > 300,]
> sub.euc = BlueMountains$eucalypt[BlueMountains$eucalypt$Y > 6270 & BlueMountains$eucalypt$X > 300,]
> ppm.form = ~poly(FC, TMP_MIN, TMP_MAX, RAIN_ANN, degree = 2) + poly(D_MAIN_RDS, D_URBAN, degree = 2)
> ppm.fit = ppmlasso(ppm.form, sp.xy = sub.euc, env.grid = sub.env, sp.scale = 1, n.fits = 20,
+ writefile = FALSE)
Calculating species environmental data for variable: FC
Calculating species environmental data for variable: D_MAIN_RDS
Calculating species environmental data for variable: D_URBAN
Calculating species environmental data for variable: RAIN_ANN
Calculating species environmental data for variable: TMP_MAX
Calculating species environmental data for variable: TMP_MIN
Fitting Models: 1 of 20
Fitting Models: 2 of 20
Fitting Models: 3 of 20
Fitting Models: 4 of 20
Fitting Models: 5 of 20
Fitting Models: 6 of 20
Fitting Models: 7 of 20
Fitting Models: 8 of 20
Fitting Models: 9 of 20
Fitting Models: 10 of 20
Fitting Models: 11 of 20
Fitting Models: 12 of 20
Fitting Models: 13 of 20
Fitting Models: 14 of 20
Fitting Models: 15 of 20
Fitting Models: 16 of 20
Fitting Models: 17 of 20
Fitting Models: 18 of 20
Fitting Models: 19 of 20
Fitting Models: 20 of 20
> envelope(ppm.fit, Kinhom, nsim = 20)
Error in UseMethod("envelope") :
no applicable method for 'envelope' applied to an object of class "c('ppmlasso', 'list')"
Calls: envelope
Execution halted
Flavors: r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 1.2
Check: examples
Result: ERROR
Running examples in ‘ppmlasso-Ex.R’ failed
The error most likely occurred in:
> ### Name: envelope.ppmlasso
> ### Title: Calculates simulation envelopes for goodness-of-fit
> ### Aliases: envelope.ppmlasso
>
> ### ** Examples
>
> data(BlueMountains)
> sub.env = BlueMountains$env[BlueMountains$env$Y > 6270 & BlueMountains$env$X > 300,]
> sub.euc = BlueMountains$eucalypt[BlueMountains$eucalypt$Y > 6270 & BlueMountains$eucalypt$X > 300,]
> ppm.form = ~poly(FC, TMP_MIN, TMP_MAX, RAIN_ANN, degree = 2) + poly(D_MAIN_RDS, D_URBAN, degree = 2)
> ppm.fit = ppmlasso(ppm.form, sp.xy = sub.euc, env.grid = sub.env, sp.scale = 1, n.fits = 20,
+ writefile = FALSE)
Calculating species environmental data for variable: FC
Calculating species environmental data for variable: D_MAIN_RDS
Calculating species environmental data for variable: D_URBAN
Calculating species environmental data for variable: RAIN_ANN
Calculating species environmental data for variable: TMP_MAX
Calculating species environmental data for variable: TMP_MIN
Fitting Models: 1 of 20
Fitting Models: 2 of 20
Fitting Models: 3 of 20
Fitting Models: 4 of 20
Fitting Models: 5 of 20
Fitting Models: 6 of 20
Fitting Models: 7 of 20
Fitting Models: 8 of 20
Fitting Models: 9 of 20
Fitting Models: 10 of 20
Fitting Models: 11 of 20
Fitting Models: 12 of 20
Fitting Models: 13 of 20
Fitting Models: 14 of 20
Fitting Models: 15 of 20
Fitting Models: 16 of 20
Fitting Models: 17 of 20
Fitting Models: 18 of 20
Fitting Models: 19 of 20
Fitting Models: 20 of 20
> envelope(ppm.fit, Kinhom, nsim = 20)
Error in UseMethod("envelope") :
no applicable method for 'envelope' applied to an object of class "c('ppmlasso', 'list')"
Calls: envelope
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-ix86+x86_64