Last updated on 2023-07-07 06:51:15 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.5.17 | 37.83 | 359.14 | 396.97 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.5.17 | 27.02 | 256.15 | 283.17 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.5.17 | 490.97 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 0.5.17 | 530.04 | OK | |||
| r-devel-windows-x86_64 | 0.5.17 | 25.00 | 210.00 | 235.00 | ERROR | |
| r-patched-linux-x86_64 | 0.5.17 | 29.77 | 336.11 | 365.88 | ERROR | |
| r-release-linux-x86_64 | 0.5.17 | 25.83 | 336.42 | 362.25 | ERROR | |
| r-release-macos-arm64 | 0.5.17 | 127.00 | OK | |||
| r-release-macos-x86_64 | 0.5.17 | 247.00 | OK | |||
| r-release-windows-x86_64 | 0.5.17 | 37.00 | 308.00 | 345.00 | ERROR | |
| r-oldrel-macos-arm64 | 0.5.17 | 95.00 | OK | |||
| r-oldrel-macos-x86_64 | 0.5.17 | 158.00 | OK | |||
| r-oldrel-windows-x86_64 | 0.5.17 | 37.00 | 285.00 | 322.00 | ERROR |
Version: 0.5.17
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘rasterList_vignette_002.Rmd’ using rmarkdown
meuse package:sp R Documentation
_<08>M_<08>e_<08>u_<08>s_<08>e _<08>r_<08>i_<08>v_<08>e_<08>r _<08>d_<08>a_<08>t_<08>a _<08>s_<08>e_<08>t
_<08>D_<08>e_<08>s_<08>c_<08>r_<08>i_<08>p_<08>t_<08>i_<08>o_<08>n:
This data set gives locations and topsoil heavy metal
concentrations, along with a number of soil and landscape
variables at the observation locations, collected in a flood plain
of the river Meuse, near the village of Stein (NL). Heavy metal
concentrations are from composite samples of an area of
approximately 15 m x 15 m.
_<08>U_<08>s_<08>a_<08>g_<08>e:
data(meuse)
_<08>F_<08>o_<08>r_<08>m_<08>a_<08>t:
This data frame contains the following columns:
x a numeric vector; Easting (m) in Rijksdriehoek (RDH)
(Netherlands topographical) map coordinates
y a numeric vector; Northing (m) in RDH coordinates
cadmium topsoil cadmium concentration, mg kg-1 soil ("ppm"); zero
cadmium values in the original data set have been shifted to
0.2 (half the lowest non-zero value)
copper topsoil copper concentration, mg kg-1 soil ("ppm")
lead topsoil lead concentration, mg kg-1 soil ("ppm")
zinc topsoil zinc concentration, mg kg-1 soil ("ppm")
elev relative elevation above local river bed, m
dist distance to the Meuse; obtained from the nearest cell in
meuse.grid, which in turn was derived by a spread (spatial
distance) GIS operation, horizontal precision 20 metres; then
normalized to $[0,1]$
om organic matter, kg (100 kg)-1 soil (percent)
ffreq flooding frequency class: 1 = once in two years; 2 = once in
ten years; 3 = one in 50 years
soil soil type according to the 1:50 000 soil map of the
Netherlands. 1 = Rd10A (Calcareous weakly-developed meadow
soils, light sandy clay); 2 = Rd90C/VII (Non-calcareous
weakly-developed meadow soils, heavy sandy clay to light
clay); 3 = Bkd26/VII (Red Brick soil, fine-sandy, silty light
clay)
lime lime class: 0 = absent, 1 = present by field test with 5% HCl
landuse landuse class: Aa Agriculture/unspecified = , Ab =
Agr/sugar beetsm, Ag = Agr/small grains, Ah = Agr/??, Am =
Agr/maize, B = woods, Bw = trees in pasture, DEN = ??, Fh =
tall fruit trees, Fl = low fruit trees; Fw = fruit trees in
pasture, Ga = home gardens, SPO = sport field, STA = stable
yard, Tv = ?? , W = pasture
dist.m distance to river Meuse in metres, as obtained during the
field survey
_<08>N_<08>o_<08>t_<08>e:
row.names refer to the original sample number.
Soil units were mapped with a minimum delination width of 150 m,
and so somewhat generalize the landscape.
Approximate equivalent World Reference Base 2002 for Soil
Resources names are: Rd10A Gleyic Fluvisols; Rd90C Haplic
Fluvisols; Bkd26 Haplic Luvisols. Units Rd90C and Bkd26 have
winter groundwater > 80cm, summer > 120cm depth.
_<08>A_<08>u_<08>t_<08>h_<08>o_<08>r(_<08>s):
Field data were collected by Ruud van Rijn and Mathieu Rikken;
compiled for R by Edzer Pebesma; description extended by David
Rossiter
_<08>R_<08>e_<08>f_<08>e_<08>r_<08>e_<08>n_<08>c_<08>e_<08>s:
M G J Rikken and R P G Van Rijn, 1993. Soil pollution with heavy
metals - an inquiry into spatial variation, cost of mapping and
the risk evaluation of copper, cadmium, lead and zinc in the
floodplains of the Meuse west of Stein, the Netherlands.
Doctoraalveldwerkverslag, Dept. of Physical Geography, Utrecht
University
P.A. Burrough, R.A. McDonnell, 1998. Principles of Geographical
Information Systems. Oxford University Press.
Stichting voor Bodemkartering (STIBOKA), 1970. Bodemkaart van
Nederland : Blad 59 Peer, Blad 60 West en 60 Oost Sittard: schaal
1 : 50 000. Wageningen, STIBOKA.
<http://www.gstat.org/>
_<08>E_<08>x_<08>a_<08>m_<08>p_<08>l_<08>e_<08>s:
data(meuse)
summary(meuse)
coordinates(meuse) <- ~x+y
proj4string(meuse) <- CRS("+init=epsg:28992")
meuse.grid package:sp R Documentation
_<08>P_<08>r_<08>e_<08>d_<08>i_<08>c_<08>t_<08>i_<08>o_<08>n _<08>G_<08>r_<08>i_<08>d _<08>f_<08>o_<08>r _<08>M_<08>e_<08>u_<08>s_<08>e _<08>D_<08>a_<08>t_<08>a _<08>S_<08>e_<08>t
_<08>D_<08>e_<08>s_<08>c_<08>r_<08>i_<08>p_<08>t_<08>i_<08>o_<08>n:
The 'meuse.grid' data frame has 3103 rows and 7 columns; a grid
with 40 m x 40 m spacing that covers the Meuse study area (see
meuse)
_<08>U_<08>s_<08>a_<08>g_<08>e:
data(meuse.grid)
_<08>F_<08>o_<08>r_<08>m_<08>a_<08>t:
This data frame contains the following columns:
x a numeric vector; x-coordinate (see meuse)
y a numeric vector; y-coordinate (see meuse)
dist distance to the Meuse river; obtained by a spread (spatial
distance) GIS operation, from border of river; normalized to
$[0,1]$
ffreq flooding frequency class, for definitions see this item in
meuse; it is not known how this map was generated
part.a arbitrary division of the area in two areas, a and b
part.b see 'part.a'
soil soil type, for definitions see this item in meuse; it is
questionable whether these data come from a real soil map,
they do not match the published 1:50 000 map
_<08>D_<08>e_<08>t_<08>a_<08>i_<08>l_<08>s:
'x' and 'y' are in RD New, the Dutch topographical map coordinate
system. Roger Bivand projected this to UTM in the R-Grass
interface package.
_<08>S_<08>o_<08>u_<08>r_<08>c_<08>e:
<http://www.gstat.org/>
_<08>R_<08>e_<08>f_<08>e_<08>r_<08>e_<08>n_<08>c_<08>e_<08>s:
See the meuse documentation
_<08>E_<08>x_<08>a_<08>m_<08>p_<08>l_<08>e_<08>s:
data(meuse.grid)
coordinates(meuse.grid) = ~x+y
proj4string(meuse.grid) <- CRS("+init=epsg:28992")
gridded(meuse.grid) = TRUE
spplot(meuse.grid)
Quitting from lines 157-160 [unnamed-chunk-11] (rasterList_vignette_002.Rmd)
Error: processing vignette ‘rasterList_vignette_002.Rmd’ failed with diagnostics:
error in evaluating the argument ‘xy’ in selecting a method for function ‘cellFromXY’: sf required for evolution_status==2L
--- failed re-building ‘rasterList_vignette_002.Rmd’
SUMMARY: processing the following file failed:
‘rasterList_vignette_002.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 0.5.17
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘rasterList_vignette_002.Rmd’ using rmarkdown
meuse package:sp R Documentation
_<08>M_<08>e_<08>u_<08>s_<08>e _<08>r_<08>i_<08>v_<08>e_<08>r _<08>d_<08>a_<08>t_<08>a _<08>s_<08>e_<08>t
_<08>D_<08>e_<08>s_<08>c_<08>r_<08>i_<08>p_<08>t_<08>i_<08>o_<08>n:
This data set gives locations and topsoil heavy metal
concentrations, along with a number of soil and landscape
variables at the observation locations, collected in a flood plain
of the river Meuse, near the village of Stein (NL). Heavy metal
concentrations are from composite samples of an area of
approximately 15 m x 15 m.
_<08>U_<08>s_<08>a_<08>g_<08>e:
data(meuse)
_<08>F_<08>o_<08>r_<08>m_<08>a_<08>t:
This data frame contains the following columns:
x a numeric vector; Easting (m) in Rijksdriehoek (RDH)
(Netherlands topographical) map coordinates
y a numeric vector; Northing (m) in RDH coordinates
cadmium topsoil cadmium concentration, mg kg-1 soil ("ppm"); zero
cadmium values in the original data set have been shifted to
0.2 (half the lowest non-zero value)
copper topsoil copper concentration, mg kg-1 soil ("ppm")
lead topsoil lead concentration, mg kg-1 soil ("ppm")
zinc topsoil zinc concentration, mg kg-1 soil ("ppm")
elev relative elevation above local river bed, m
dist distance to the Meuse; obtained from the nearest cell in
meuse.grid, which in turn was derived by a spread (spatial
distance) GIS operation, horizontal precision 20 metres; then
normalized to $[0,1]$
om organic matter, kg (100 kg)-1 soil (percent)
ffreq flooding frequency class: 1 = once in two years; 2 = once in
ten years; 3 = one in 50 years
soil soil type according to the 1:50 000 soil map of the
Netherlands. 1 = Rd10A (Calcareous weakly-developed meadow
soils, light sandy clay); 2 = Rd90C/VII (Non-calcareous
weakly-developed meadow soils, heavy sandy clay to light
clay); 3 = Bkd26/VII (Red Brick soil, fine-sandy, silty light
clay)
lime lime class: 0 = absent, 1 = present by field test with 5% HCl
landuse landuse class: Aa Agriculture/unspecified = , Ab =
Agr/sugar beetsm, Ag = Agr/small grains, Ah = Agr/??, Am =
Agr/maize, B = woods, Bw = trees in pasture, DEN = ??, Fh =
tall fruit trees, Fl = low fruit trees; Fw = fruit trees in
pasture, Ga = home gardens, SPO = sport field, STA = stable
yard, Tv = ?? , W = pasture
dist.m distance to river Meuse in metres, as obtained during the
field survey
_<08>N_<08>o_<08>t_<08>e:
row.names refer to the original sample number.
Soil units were mapped with a minimum delination width of 150 m,
and so somewhat generalize the landscape.
Approximate equivalent World Reference Base 2002 for Soil
Resources names are: Rd10A Gleyic Fluvisols; Rd90C Haplic
Fluvisols; Bkd26 Haplic Luvisols. Units Rd90C and Bkd26 have
winter groundwater > 80cm, summer > 120cm depth.
_<08>A_<08>u_<08>t_<08>h_<08>o_<08>r(_<08>s):
Field data were collected by Ruud van Rijn and Mathieu Rikken;
compiled for R by Edzer Pebesma; description extended by David
Rossiter
_<08>R_<08>e_<08>f_<08>e_<08>r_<08>e_<08>n_<08>c_<08>e_<08>s:
M G J Rikken and R P G Van Rijn, 1993. Soil pollution with heavy
metals - an inquiry into spatial variation, cost of mapping and
the risk evaluation of copper, cadmium, lead and zinc in the
floodplains of the Meuse west of Stein, the Netherlands.
Doctoraalveldwerkverslag, Dept. of Physical Geography, Utrecht
University
P.A. Burrough, R.A. McDonnell, 1998. Principles of Geographical
Information Systems. Oxford University Press.
Stichting voor Bodemkartering (STIBOKA), 1970. Bodemkaart van
Nederland : Blad 59 Peer, Blad 60 West en 60 Oost Sittard: schaal
1 : 50 000. Wageningen, STIBOKA.
<http://www.gstat.org/>
_<08>E_<08>x_<08>a_<08>m_<08>p_<08>l_<08>e_<08>s:
data(meuse)
summary(meuse)
coordinates(meuse) <- ~x+y
proj4string(meuse) <- CRS("+init=epsg:28992")
meuse.grid package:sp R Documentation
_<08>P_<08>r_<08>e_<08>d_<08>i_<08>c_<08>t_<08>i_<08>o_<08>n _<08>G_<08>r_<08>i_<08>d _<08>f_<08>o_<08>r _<08>M_<08>e_<08>u_<08>s_<08>e _<08>D_<08>a_<08>t_<08>a _<08>S_<08>e_<08>t
_<08>D_<08>e_<08>s_<08>c_<08>r_<08>i_<08>p_<08>t_<08>i_<08>o_<08>n:
The 'meuse.grid' data frame has 3103 rows and 7 columns; a grid
with 40 m x 40 m spacing that covers the Meuse study area (see
meuse)
_<08>U_<08>s_<08>a_<08>g_<08>e:
data(meuse.grid)
_<08>F_<08>o_<08>r_<08>m_<08>a_<08>t:
This data frame contains the following columns:
x a numeric vector; x-coordinate (see meuse)
y a numeric vector; y-coordinate (see meuse)
dist distance to the Meuse river; obtained by a spread (spatial
distance) GIS operation, from border of river; normalized to
$[0,1]$
ffreq flooding frequency class, for definitions see this item in
meuse; it is not known how this map was generated
part.a arbitrary division of the area in two areas, a and b
part.b see 'part.a'
soil soil type, for definitions see this item in meuse; it is
questionable whether these data come from a real soil map,
they do not match the published 1:50 000 map
_<08>D_<08>e_<08>t_<08>a_<08>i_<08>l_<08>s:
'x' and 'y' are in RD New, the Dutch topographical map coordinate
system. Roger Bivand projected this to UTM in the R-Grass
interface package.
_<08>S_<08>o_<08>u_<08>r_<08>c_<08>e:
<http://www.gstat.org/>
_<08>R_<08>e_<08>f_<08>e_<08>r_<08>e_<08>n_<08>c_<08>e_<08>s:
See the meuse documentation
_<08>E_<08>x_<08>a_<08>m_<08>p_<08>l_<08>e_<08>s:
data(meuse.grid)
coordinates(meuse.grid) = ~x+y
proj4string(meuse.grid) <- CRS("+init=epsg:28992")
gridded(meuse.grid) = TRUE
spplot(meuse.grid)
Quitting from lines 157-160 [unnamed-chunk-11] (rasterList_vignette_002.Rmd)
Error: processing vignette 'rasterList_vignette_002.Rmd' failed with diagnostics:
error in evaluating the argument 'xy' in selecting a method for function 'cellFromXY': sf required for evolution_status==2L
--- failed re-building ‘rasterList_vignette_002.Rmd’
SUMMARY: processing the following file failed:
‘rasterList_vignette_002.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.5.17
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'rasterList_vignette_002.Rmd' using rmarkdown
Quitting from lines 157-160 [unnamed-chunk-11] (rasterList_vignette_002.Rmd)
Error: processing vignette 'rasterList_vignette_002.Rmd' failed with diagnostics:
error in evaluating the argument 'xy' in selecting a method for function 'cellFromXY': sf required for evolution_status==2L
--- failed re-building 'rasterList_vignette_002.Rmd'
SUMMARY: processing the following file failed:
'rasterList_vignette_002.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64