CRAN Package Check Results for Package bnspatial

Last updated on 2023-10-06 07:56:55 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1.1 3.80 93.41 97.21 ERROR
r-devel-linux-x86_64-debian-gcc 1.1.1 3.60 71.26 74.86 ERROR
r-devel-linux-x86_64-fedora-clang 1.1.1 126.37 ERROR
r-devel-linux-x86_64-fedora-gcc 1.1.1 134.48 ERROR
r-devel-windows-x86_64 1.1.1 5.00 90.00 95.00 ERROR
r-patched-linux-x86_64 1.1.1 3.97 90.29 94.26 ERROR
r-release-linux-x86_64 1.1.1 3.49 92.54 96.03 ERROR
r-release-macos-arm64 1.1.1 61.00 OK
r-release-macos-x86_64 1.1.1 97.00 OK
r-release-windows-x86_64 1.1.1 6.00 109.00 115.00 ERROR
r-oldrel-macos-arm64 1.1.1 46.00 OK
r-oldrel-macos-x86_64 1.1.1 64.00 OK
r-oldrel-windows-x86_64 1.1.1 7.00 104.00 111.00 ERROR

Check Details

Version: 1.1.1
Check: data for non-ASCII characters
Result: WARN
     Error loading dataset 'ConwyData':
     Error in .requirePackage(package) :
     unable to find required package 'graph'
    
     The dataset(s) may use package(s) not declared in Depends/Imports.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64

Version: 1.1.1
Check: examples
Result: ERROR
    Running examples in ‘bnspatial-Ex.R’ failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: bnspatial
    > ### Title: Spatialize the Bayesian network
    > ### Aliases: bnspatial
    >
    > ### ** Examples
    >
    > list2env(ConwyData, environment())
    <environment: R_GlobalEnv>
    >
    > network <- LandUseChange
    > spatialData <- c(ConwyLU, ConwySlope, ConwyStatus)
    > lookup <- LUclasses
    >
    > bn <- bnspatial(network, 'FinalLULC', spatialData, lookup)
    
    "CurrentLULC" points to:
     -> ConwyLU
    
    With states:
    forest arable other
    
    Represented by integer values:
    2 <-> 3 <-> 1
    ----------------------------------
    
    "Slope" points to:
     -> ConwySlope
    
    With states:
    flat moderate steep
    
    Discretized by intervals:
    -Inf <-> 1 <-> 7 <-> Inf
    ----------------------------------
    
    "LegalStatus" points to:
     -> ConwyStatus
    
    With states:
    public private protected
    
    Represented by integer values:
    4 <-> 3 <-> 1
    ----------------------------------
    Loading required package: graph
    Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
     there is no package called ‘graph’
    Error in .requirePackage(package) :
     unable to find required package ‘graph’
    Calls: bnspatial ... .extendsForS3 -> extends -> getClassDef -> .requirePackage
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.1.1
Check: re-building of vignette outputs
Result: ERROR
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘bnspatial.Rmd’ using rmarkdown
    
    Quitting from lines 93-114 [unnamed-chunk-5] (bnspatial.Rmd)
    Error: processing vignette 'bnspatial.Rmd' failed with diagnostics:
    unable to find required package 'graph'
    --- failed re-building ‘bnspatial.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘bnspatial.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.1.1
Check: examples
Result: ERROR
    Running examples in ‘bnspatial-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: bnspatial
    > ### Title: Spatialize the Bayesian network
    > ### Aliases: bnspatial
    >
    > ### ** Examples
    >
    > list2env(ConwyData, environment())
    <environment: R_GlobalEnv>
    >
    > network <- LandUseChange
    > spatialData <- c(ConwyLU, ConwySlope, ConwyStatus)
    > lookup <- LUclasses
    >
    > bn <- bnspatial(network, 'FinalLULC', spatialData, lookup)
    
    "CurrentLULC" points to:
     -> ConwyLU
    
    With states:
    forest arable other
    
    Represented by integer values:
    2 <-> 3 <-> 1
    ----------------------------------
    
    "Slope" points to:
     -> ConwySlope
    
    With states:
    flat moderate steep
    
    Discretized by intervals:
    -Inf <-> 1 <-> 7 <-> Inf
    ----------------------------------
    
    "LegalStatus" points to:
     -> ConwyStatus
    
    With states:
    public private protected
    
    Represented by integer values:
    4 <-> 3 <-> 1
    ----------------------------------
    Loading required package: graph
    Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
     there is no package called ‘graph’
    Error in .requirePackage(package) :
     unable to find required package ‘graph’
    Calls: bnspatial ... .extendsForS3 -> extends -> getClassDef -> .requirePackage
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64

Version: 1.1.1
Check: re-building of vignette outputs
Result: ERROR
    Error(s) in re-building vignettes:
    --- re-building ‘bnspatial.Rmd’ using rmarkdown
    
    Quitting from lines 93-114 [unnamed-chunk-5] (bnspatial.Rmd)
    Error: processing vignette 'bnspatial.Rmd' failed with diagnostics:
    unable to find required package 'graph'
    --- failed re-building ‘bnspatial.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘bnspatial.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64

Version: 1.1.1
Check: examples
Result: ERROR
    Running examples in ‘bnspatial-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: bnspatial
    > ### Title: Spatialize the Bayesian network
    > ### Aliases: bnspatial
    >
    > ### ** Examples
    >
    > list2env(ConwyData, environment())
    <environment: R_GlobalEnv>
    >
    > network <- LandUseChange
    > spatialData <- c(ConwyLU, ConwySlope, ConwyStatus)
    > lookup <- LUclasses
    >
    > bn <- bnspatial(network, 'FinalLULC', spatialData, lookup)
    
    "CurrentLULC" points to:
     -> ConwyLU
    
    With states:
    forest arable other
    
    Represented by integer values:
    2 <-> 3 <-> 1
    ----------------------------------
    
    "Slope" points to:
     -> ConwySlope
    
    With states:
    flat moderate steep
    
    Discretized by intervals:
    -Inf <-> 1 <-> 7 <-> Inf
    ----------------------------------
    
    "LegalStatus" points to:
     -> ConwyStatus
    
    With states:
    public private protected
    
    Represented by integer values:
    4 <-> 3 <-> 1
    ----------------------------------
    Loading required package: graph
    Loading required package: BiocGenerics
    
    Attaching package: ‘BiocGenerics’
    
    The following objects are masked from ‘package:stats’:
    
     IQR, mad, sd, var, xtabs
    
    The following objects are masked from ‘package:base’:
    
     Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append,
     as.data.frame, basename, cbind, colnames, dirname, do.call,
     duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
     lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
     pmin.int, rank, rbind, rownames, sapply, setdiff, table, tapply,
     union, unique, unsplit, which.max, which.min
    
    Error in moralize.default(getgin(object, "dag"), result = "dgCMatrix") :
     object 'm' not found
    Calls: bnspatial ... .add_jtree.cpt_grain -> moralize -> moralize.default -> as -> .class1
    Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 1.1.1
Check: re-building of vignette outputs
Result: ERROR
    Error(s) in re-building vignettes:
    --- re-building ‘bnspatial.Rmd’ using rmarkdown
    
    Quitting from lines 93-114 [unnamed-chunk-5] (bnspatial.Rmd)
    Error: processing vignette 'bnspatial.Rmd' failed with diagnostics:
    object 'm' not found
    --- failed re-building ‘bnspatial.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘bnspatial.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc