Last updated on 2024-01-11 05:53:54 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.1 | 6.84 | 149.69 | 156.53 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.1.1 | 5.70 | 111.32 | 117.02 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.1.1 | 188.11 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 0.1.1 | 190.85 | NOTE | |||
| r-devel-windows-x86_64 | 0.1.1 | 8.00 | 175.00 | 183.00 | OK | |
| r-patched-linux-x86_64 | 0.1.1 | 4.31 | 143.65 | 147.96 | OK | |
| r-release-linux-x86_64 | 0.1.1 | 5.25 | 144.06 | 149.31 | OK | |
| r-release-macos-arm64 | 0.1.1 | 68.00 | OK | |||
| r-release-macos-x86_64 | 0.1.1 | 165.00 | OK | |||
| r-release-windows-x86_64 | 0.1.1 | 9.00 | 236.00 | 245.00 | ERROR | |
| r-oldrel-macos-arm64 | 0.1.1 | 61.00 | OK | |||
| r-oldrel-windows-x86_64 | 0.1.1 | 10.00 | 250.00 | 260.00 | OK |
Version: 0.1.1
Check: dependencies in R code
Result: NOTE
Namespaces in Imports field not imported from:
‘MASS’ ‘base’ ‘graphics’ ‘janitor’ ‘rlang’ ‘testthat’ ‘utils’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.1.1
Check: tests
Result: ERROR
Running 'test_boot_one.R' [16s]
Running 'test_boot_two.R' [20s]
Running 'test_equiv_tost.R' [104s]
Running 'test_plot_one_group.R' [9s]
Running 'test_plot_two_groups.R' [14s]
Running the tests in 'tests/test_boot_one.R' failed.
Complete output:
> library(ThermalSampleR)
> library(testthat)
> # run test_file("test_ThermalSampleR.R") to test everything in this R file
>
> coreid = ThermalSampleR::coreid_data
>
> ############################################################################################
> # BOOT_ONE and PLOT_ONE_GROUP TESTS
> ############################################################################################
>
> ########################################
> # Test for general errors: boot_one
> ########################################
>
> bt_one = boot_one(data=coreid, groups_col=col,
+ groups_which="Catorhintha schaffneri_APM",
+ n_max=49, iter=15, response=response)
>
> testthat::test_that("No error is thrown in boot_one function", {
+
+ # Call the function and check for errors
+ testthat::expect_no_error(boot_one(data=coreid, groups_col=col,
+ groups_which="Catorhintha schaffneri_APM",
+ n_max=49, iter=15, response=response))
+ })
Test passed 😀
>
> ##################################################
> # Test: user puts in the incorrect groups_col
> ##################################################
>
> testthat::test_that("Error is thrown in boot_one function", {
+
+ # Call the function and check for errors
+ testthat::expect_error(boot_one(data=coreid, groups_col="Catorhintha schaffneri_APM",
+ groups_which="Catorhintha schaffneri_APM",
+ n_max=49, iter=15, response=response))
+ })
Test passed 🌈
>
> ########################################
> # check that the col column consists of names
> ########################################
>
> testthat::test_that("Incorrect columns in data", {
+
+ testthat::expect_type(coreid$col, "character")
+ })
Test passed 🥳
>
> ########################################
> # check that the response column contains integers
> ########################################
>
> testthat::test_that("Incorrect columns in data", {
+
+ testthat::expect_type(coreid$response, "integer")
+ })
Test passed 🎉
>
> ########################################
> # Test for the class of bt_one output
> ########################################
> testthat::test_that("boot_one output is the list class", {
+
+ testthat::expect_type(bt_one, "list")
+ testthat::expect_type(bt_one$mean_low_ci[1], "double")
+ testthat::expect_equal(ncol(bt_one), 14)
+ })
Test passed 😸
>
> ########################################
> # Test for NA values in bt_one
> ########################################
>
> bt_one_buggy = bt_one
> bt_one_buggy$mean_low_ci[1] = NA
>
> testthat::test_that("No NA values in the dataframe", {
+ testthat::expect_false(any(is.na(bt_one)), info = "The dataframe contains NA values.")
+ })
── Failure: No NA values in the dataframe ──────────────────────────────────────
any(is.na(bt_one)) is not FALSE
`actual`: TRUE
`expected`: FALSE
The dataframe contains NA values.
Error: Test failed
Execution halted
Flavor: r-release-windows-x86_64