CRAN Package Check Results for Package Rphylopars

Last updated on 2024-01-12 18:53:17 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.3.9 74.56 150.40 224.96 WARN
r-devel-linux-x86_64-debian-gcc 0.3.9 52.25 110.13 162.38 WARN
r-devel-linux-x86_64-fedora-clang 0.3.9 307.80 WARN
r-devel-linux-x86_64-fedora-gcc 0.3.9 305.90 WARN
r-devel-windows-x86_64 0.3.9 60.00 134.00 194.00 WARN
r-patched-linux-x86_64 0.3.9 65.10 141.91 207.01 WARN
r-release-linux-x86_64 0.3.9 56.07 141.55 197.62 WARN
r-release-macos-arm64 0.3.9 84.00 NOTE
r-release-macos-x86_64 0.3.9 131.00 NOTE
r-release-windows-x86_64 0.3.9 74.00 172.00 246.00 WARN
r-oldrel-macos-arm64 0.3.9 66.00 NOTE
r-oldrel-windows-x86_64 0.3.9 71.00 170.00 241.00 WARN

Check Details

Version: 0.3.9
Check: whether package can be installed
Result: WARN Found the following significant warnings: phylopars_rcpp.cpp:125:11: warning: 'set_cerr_stream' is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] phylopars_rcpp.cpp:144:11: warning: 'set_cerr_stream' is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] phylopars_rcpp.cpp:179:11: warning: 'set_cerr_stream' is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/Rphylopars.Rcheck/00install.out’ for details. * used C++ compiler: ‘Debian clang version 17.0.6 (3)’ Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.3.9
Check: Rd files
Result: NOTE checkRd: (-1) simtraits.Rd:7: Lost braces 7 | Simulates traits for code{phylopars} estimation. | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 0.3.9
Check: Rd contents
Result: NOTE Argument items with no description in Rd file 'anova.phylopars.lm.Rd': ‘\dots’ Argument items with no description in Rd file 'logLik.phylopars.Rd': ‘\dots’ Argument items with no description in Rd file 'logLik.phylopars.lm.Rd': ‘\dots’ Argument items with no description in Rd file 'print.SSC.Rd': ‘\dots’ Argument items with no description in Rd file 'print.phylopars.Rd': ‘\dots’ Argument items with no description in Rd file 'print.phylopars.lm.Rd': ‘\dots’ Argument items with no description in Rd file 'summary.phylopars.Rd': ‘\dots’ Argument items with no description in Rd file 'summary.phylopars.lm.Rd': ‘\dots’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64

Version: 0.3.9
Check: whether package can be installed
Result: WARN Found the following significant warnings: phylopars_rcpp.cpp:125:26: warning: ‘void arma::set_cerr_stream(const std::ostream&)’ is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] phylopars_rcpp.cpp:144:26: warning: ‘void arma::set_cerr_stream(const std::ostream&)’ is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] phylopars_rcpp.cpp:179:26: warning: ‘void arma::set_cerr_stream(const std::ostream&)’ is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/Rphylopars.Rcheck/00install.out’ for details. * used C++ compiler: ‘g++-13 (Debian 13.2.0-9) 13.2.0’ Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.3.9
Check: whether package can be installed
Result: WARN Found the following significant warnings: phylopars_rcpp.cpp:125:11: warning: 'set_cerr_stream' is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] phylopars_rcpp.cpp:144:11: warning: 'set_cerr_stream' is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] phylopars_rcpp.cpp:179:11: warning: 'set_cerr_stream' is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] See ‘/data/gannet/ripley/R/packages/tests-clang/Rphylopars.Rcheck/00install.out’ for details. * used C++ compiler: ‘clang version 17.0.6’ Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.3.9
Check: whether package can be installed
Result: WARN Found the following significant warnings: phylopars_rcpp.cpp:125:26: warning: 'void arma::set_cerr_stream(const std::ostream&)' is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] phylopars_rcpp.cpp:144:26: warning: 'void arma::set_cerr_stream(const std::ostream&)' is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] phylopars_rcpp.cpp:179:26: warning: 'void arma::set_cerr_stream(const std::ostream&)' is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] See ‘/data/gannet/ripley/R/packages/tests-devel/Rphylopars.Rcheck/00install.out’ for details. * used C++ compiler: ‘g++-13 (GCC) 13.2.0’ Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 0.3.9
Check: whether package can be installed
Result: WARN Found the following significant warnings: phylopars_rcpp.cpp:125:26: warning: 'void arma::set_cerr_stream(const std::ostream&)' is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] phylopars_rcpp.cpp:144:26: warning: 'void arma::set_cerr_stream(const std::ostream&)' is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] phylopars_rcpp.cpp:179:26: warning: 'void arma::set_cerr_stream(const std::ostream&)' is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] See 'd:/Rcompile/CRANpkg/local/4.4/Rphylopars.Rcheck/00install.out' for details. * used C++ compiler: 'g++.exe (GCC) 12.3.0' Flavor: r-devel-windows-x86_64

Version: 0.3.9
Check: whether package can be installed
Result: WARN Found the following significant warnings: phylopars_rcpp.cpp:125:26: warning: ‘void arma::set_cerr_stream(const std::ostream&)’ is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] phylopars_rcpp.cpp:144:26: warning: ‘void arma::set_cerr_stream(const std::ostream&)’ is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] phylopars_rcpp.cpp:179:26: warning: ‘void arma::set_cerr_stream(const std::ostream&)’ is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/Rphylopars.Rcheck/00install.out’ for details. * used C++ compiler: ‘g++-13 (Debian 13.2.0-9) 13.2.0’ Flavor: r-patched-linux-x86_64

Version: 0.3.9
Check: whether package can be installed
Result: WARN Found the following significant warnings: phylopars_rcpp.cpp:125:26: warning: ‘void arma::set_cerr_stream(const std::ostream&)’ is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] phylopars_rcpp.cpp:144:26: warning: ‘void arma::set_cerr_stream(const std::ostream&)’ is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] phylopars_rcpp.cpp:179:26: warning: ‘void arma::set_cerr_stream(const std::ostream&)’ is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] See ‘/home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/Rphylopars.Rcheck/00install.out’ for details. * used C++ compiler: ‘g++-13 (Debian 13.2.0-7) 13.2.0’ Flavor: r-release-linux-x86_64

Version: 0.3.9
Check: installed package size
Result: NOTE installed size is 6.0Mb sub-directories of 1Mb or more: libs 5.7Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64

Version: 0.3.9
Check: whether package can be installed
Result: WARN Found the following significant warnings: phylopars_rcpp.cpp:125:26: warning: 'void arma::set_cerr_stream(const std::ostream&)' is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] phylopars_rcpp.cpp:144:26: warning: 'void arma::set_cerr_stream(const std::ostream&)' is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] phylopars_rcpp.cpp:179:26: warning: 'void arma::set_cerr_stream(const std::ostream&)' is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] See 'd:/Rcompile/CRANpkg/local/4.3/Rphylopars.Rcheck/00install.out' for details. * used C++ compiler: 'g++.exe (GCC) 12.3.0' Flavor: r-release-windows-x86_64

Version: 0.3.9
Check: whether package can be installed
Result: WARN Found the following significant warnings: phylopars_rcpp.cpp:125:11: warning: 'void arma::set_cerr_stream(const ostream&)' is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] phylopars_rcpp.cpp:125:37: warning: 'void arma::set_cerr_stream(const ostream&)' is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] phylopars_rcpp.cpp:144:11: warning: 'void arma::set_cerr_stream(const ostream&)' is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] phylopars_rcpp.cpp:144:37: warning: 'void arma::set_cerr_stream(const ostream&)' is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] phylopars_rcpp.cpp:179:11: warning: 'void arma::set_cerr_stream(const ostream&)' is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] phylopars_rcpp.cpp:179:37: warning: 'void arma::set_cerr_stream(const ostream&)' is deprecated: this function does nothing; instead use ARMA_CERR_STREAM or ARMA_WARN_LEVEL; see documentation [-Wdeprecated-declarations] Flavor: r-oldrel-windows-x86_64