Last updated on 2024-02-29 08:48:57 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.2 | 4.67 | 45.81 | 50.48 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.2 | 2.61 | 35.27 | 37.88 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.2 | 64.83 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.2 | 40.92 | OK | |||
| r-devel-windows-x86_64 | 1.1.2 | 5.00 | 315.00 | 320.00 | OK | |
| r-patched-linux-x86_64 | 1.1.2 | 3.39 | 43.45 | 46.84 | OK | |
| r-release-linux-x86_64 | 1.1.2 | 2.64 | 42.82 | 45.46 | OK | |
| r-release-macos-arm64 | 1.1.2 | 34.00 | OK | |||
| r-release-macos-x86_64 | 1.1.2 | 70.00 | OK | |||
| r-release-windows-x86_64 | 1.1.2 | 6.00 | 339.00 | 345.00 | ERROR | |
| r-oldrel-macos-arm64 | 1.1.2 | 30.00 | OK | |||
| r-oldrel-windows-x86_64 | 1.1.2 | 6.00 | 336.00 | 342.00 | ERROR |
Version: 1.1.2
Check: tests
Result: ERROR
Running 'testthat.R' [271s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(jlmerclusterperm)
>
> test_check("jlmerclusterperm")
Julia Version 1.8.0
Commit 5544a0fab7 (2022-08-17 13:38 UTC)
Platform Info:
OS: Windows (x86_64-w64-mingw32)
CPU: 56 × Intel(R) Xeon(R) CPU E5-2680 v4 @ 2.40GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-13.0.1 (ORCJIT, broadwell)
Threads: 1 on 56 virtual cores
nothing
ℹ Starting Julia with 2 threads
✔ Starting Julia with 2 threads [7.6s]
ℹ Activating package environment
✔ Activating package environment [16.6s]
Status `C:\Users\CRAN\AppData\Local\R\cache\R\jlmerclusterperm\julia\Project.toml`
[a93c6f00] DataFrames v1.6.1
[31c24e10] Distributions v0.25.103
[38e38edf] GLM v1.9.0
[2a59065a] JlmerClusterPerm v0.1.1 `JlmerClusterPerm`
[ff71e718] MixedModels v4.22.2
[92933f4c] ProgressMeter v1.9.0
[74087812] Random123 v1.6.1
⌃ [2913bbd2] StatsBase v0.33.21
[3eaba693] StatsModels v0.7.3
[fd094767] Suppressor v0.2.6
[9a3f8284] Random
Info Packages marked with ⌃ have new versions available
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i Starting Julia with 2 threads
v Starting Julia with 2 threads [6.8s]
i Activating package environment
Precompiling project...
✓ JlmerClusterPerm
1 dependency successfully precompiled in 81 seconds. 110 already precompiled.
v Activating package environment [1m 31.7s]
i Running package setup scripts (1/11)
i Running package setup scripts (6/11)
i Running package setup scripts (9/11)
ERROR: LoadError: UndefVarError: ByRow not defined
Stacktrace:
[1] include
@ .\Base.jl:419 [inlined]
[2] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt64}}, source::Nothing)
@ Base .\loading.jl:1554
[3] top-level scope
@ stdin:1
in expression starting at C:\Users\CRAN\.julia\packages\DataFrames\58MUJ\src\DataFrames.jl:1
in expression starting at stdin:1
x Running package setup scripts (9/11) [57.3s]
ERROR: LoadError: UndefVarError: ByRow not defined
Stacktrace:
[1] include
@ .\Base.jl:419 [inlined]
[2] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt64}}, source::Nothing)
@ Base .\loading.jl:1554
[3] top-level scope
@ stdin:1
in expression starting at C:\Users\CRAN\.julia\packages\DataFrames\58MUJ\src\DataFrames.jl:1
in expression starting at stdin:1
[ FAIL 4 | WARN 0 | SKIP 7 | PASS 5 ]
══ Skipped tests (7) ═══════════════════════════════════════════════════════════
• On CRAN (7): 'test-jlmer.R:1:1', 'test-julia_rng.R:1:1',
'test-permute.R:1:1', 'test-progress.R:1:1', 'test-singularity.R:1:1',
'test-threshold_search.R:1:1', 'test-timewise_statistics.R:1:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-aaa-b-setup.R:11:3'): Setup with seed works (use 2 for testing) ──
Error: Evaluation in Julia failed.
Original Julia error message:
LoadError: Failed to precompile DataFrames [a93c6f00-e57d-5684-b7b6-d8193f3e46c0] to C:\Users\CRAN\.julia\compiled\v1.8\DataFrames\jl_DC84.tmp.
Stacktrace:
[1] error(s::String)
@ Base .\error.jl:35
[2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool)
@ Base .\loading.jl:1705
[3] compilecache
@ .\loading.jl:1649 [inlined]
[4] _require(pkg::Base.PkgId)
@ Base .\loading.jl:1337
[5] _require_prelocked(uuidkey::Base.PkgId)
@ Base .\loading.jl:1200
[6] macro expansion
@ .\loading.jl:1180 [inlined]
[7] macro expansion
@ .\lock.jl:223 [inlined]
[8] require(into::Module, mod::Symbol)
@ Base .\loading.jl:1144
[9] eval
@ .\boot.jl:368 [inlined]
[10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
@ Base .\loading.jl:1428
[11] include_string (repeats 2 times)
@ .\loading.jl:1438 [inlined]
[12] mainevalcmd(str::String)
@ Main.RConnector D:\RCompile\CRANpkg\lib\4.3\JuliaConnectoR\Julia\evaluating.jl:150
[13] invokelatest(::Any, ::Any, ::Vararg{Any}; kwargs::Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Base .\essentials.jl:729
[14] invokelatest(::Any, ::Any, ::Vararg{Any})
@ Base .\essentials.jl:726
[15] evaluate!(call::Main.RConnector.Call, communicator::Main.RConnector.CommunicatoR{Sockets.TCPSocket})
@ Main.RConnector D:\RCompile\CRANpkg\lib\4.3\JuliaConnectoR\Julia\evaluating.jl:67
[16] evaluate_checked!(call::Main.RConnector.Call, communicator::Main.RConnector.CommunicatoR{Sockets.TCPSocket})
@ Main.RConnector D:\RCompile\CRANpkg\lib\4.3\JuliaConnectoR\Julia\evaluating.jl:55
[17] serve_repl(sock::Sockets.TCPSocket)
@ Main.RConnector D:\RCompile\CRANpkg\lib\4.3\JuliaConnectoR\Julia\communicating.jl:185
[18] (::Main.RConnector.var"#3#5")()
@ Main.RConnector .\task.jl:484
in expression starting at string:1
Backtrace:
▆
1. ├─testthat::expect_true(...) at test-aaa-b-setup.R:11:3
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─jlmerclusterperm::jlmerclusterperm_setup(...)
5. └─jlmerclusterperm:::setup_with_progress(...)
6. └─jlmerclusterperm:::source_jl(verbose = verbose)
7. └─JuliaConnectoR::juliaEval(jl_pkgs[i])
8. └─JuliaConnectoR::juliaCall("RConnector.mainevalcmd", expr)
9. ├─base::tryCatch(...)
10. │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
11. │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
12. │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
13. └─JuliaConnectoR:::doCallJulia(funName, jlargs)
14. └─JuliaConnectoR:::handleCallbacksAndOutput()
── Failure ('test-aaa-b-setup.R:17:3'): RNG initializes to seed=1 counter=0 ────
get_rng_seed() (`actual`) not equal to 1 (`expected`).
`actual` is NULL
`expected` is a double vector (1)
── Error ('test-aaa-b-setup.R:18:3'): RNG initializes to seed=1 counter=0 ──────
Error: Evaluation in Julia failed.
Original Julia error message:
LoadError: UndefVarError: rng not defined
Stacktrace:
[1] top-level scope
@ string:1
[2] eval
@ .\boot.jl:368 [inlined]
[3] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
@ Base .\loading.jl:1428
[4] include_string (repeats 2 times)
@ .\loading.jl:1438 [inlined]
[5] mainevalcmd(str::String)
@ Main.RConnector D:\RCompile\CRANpkg\lib\4.3\JuliaConnectoR\Julia\evaluating.jl:150
[6] invokelatest(::Any, ::Any, ::Vararg{Any}; kwargs::Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Base .\essentials.jl:729
[7] invokelatest(::Any, ::Any, ::Vararg{Any})
@ Base .\essentials.jl:726
[8] evaluate!(call::Main.RConnector.Call, communicator::Main.RConnector.CommunicatoR{Sockets.TCPSocket})
@ Main.RConnector D:\RCompile\CRANpkg\lib\4.3\JuliaConnectoR\Julia\evaluating.jl:67
[9] evaluate_checked!(call::Main.RConnector.Call, communicator::Main.RConnector.CommunicatoR{Sockets.TCPSocket})
@ Main.RConnector D:\RCompile\CRANpkg\lib\4.3\JuliaConnectoR\Julia\evaluating.jl:55
[10] serve_repl(sock::Sockets.TCPSocket)
@ Main.RConnector D:\RCompile\CRANpkg\lib\4.3\JuliaConnectoR\Julia\communicating.jl:185
[11] (::Main.RConnector.var"#3#5")()
@ Main.RConnector .\task.jl:484
in expression starting at string:1
Backtrace:
▆
1. ├─testthat::expect_equal(get_rng_state(), 0) at test-aaa-b-setup.R:18:3
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─jlmerclusterperm::get_rng_state()
5. └─JuliaConnectoR::juliaEval("Int(rng.ctr1)")
6. └─JuliaConnectoR::juliaCall("RConnector.mainevalcmd", expr)
7. ├─base::tryCatch(...)
8. │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
9. │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
10. │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
11. └─JuliaConnectoR:::doCallJulia(funName, jlargs)
12. └─JuliaConnectoR:::handleCallbacksAndOutput()
── Error ('test-clusterpermute.R:3:1'): (code run outside of `test_that()`) ────
Error: Evaluation in Julia failed.
Original Julia error message:
LoadError: Failed to precompile DataFrames [a93c6f00-e57d-5684-b7b6-d8193f3e46c0] to C:\Users\CRAN\.julia\compiled\v1.8\DataFrames\jl_B00.tmp.
Stacktrace:
[1] error(s::String)
@ Base .\error.jl:35
[2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool)
@ Base .\loading.jl:1705
[3] compilecache
@ .\loading.jl:1649 [inlined]
[4] _require(pkg::Base.PkgId)
@ Base .\loading.jl:1337
[5] _require_prelocked(uuidkey::Base.PkgId)
@ Base .\loading.jl:1200
[6] macro expansion
@ .\loading.jl:1180 [inlined]
[7] macro expansion
@ .\lock.jl:223 [inlined]
[8] require(into::Module, mod::Symbol)
@ Base .\loading.jl:1144
[9] eval
@ .\boot.jl:368 [inlined]
[10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
@ Base .\loading.jl:1428
[11] include_string (repeats 2 times)
@ .\loading.jl:1438 [inlined]
[12] mainevalcmd(str::String)
@ Main.RConnector D:\RCompile\CRANpkg\lib\4.3\JuliaConnectoR\Julia\evaluating.jl:150
[13] invokelatest(::Any, ::Any, ::Vararg{Any}; kwargs::Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Base .\essentials.jl:729
[14] invokelatest(::Any, ::Any, ::Vararg{Any})
@ Base .\essentials.jl:726
[15] evaluate!(call::Main.RConnector.Call, communicator::Main.RConnector.CommunicatoR{Sockets.TCPSocket})
@ Main.RConnector D:\RCompile\CRANpkg\lib\4.3\JuliaConnectoR\Julia\evaluating.jl:67
[16] evaluate_checked!(call::Main.RConnector.Call, communicator::Main.RConnector.CommunicatoR{Sockets.TCPSocket})
@ Main.RConnector D:\RCompile\CRANpkg\lib\4.3\JuliaConnectoR\Julia\evaluating.jl:55
[17] serve_repl(sock::Sockets.TCPSocket)
@ Main.RConnector D:\RCompile\CRANpkg\lib\4.3\JuliaConnectoR\Julia\communicating.jl:185
[18] (::Main.RConnector.var"#3#5")()
@ Main.RConnector .\task.jl:484
in expression starting at string:1
Backtrace:
▆
1. └─jlmerclusterperm::jlmerclusterperm_setup(restart = FALSE, verbose = FALSE) at test-clusterpermute.R:3:1
2. └─jlmerclusterperm:::setup_with_progress(...)
3. └─jlmerclusterperm:::source_jl(verbose = verbose)
4. └─JuliaConnectoR::juliaEval(jl_pkgs[i])
5. └─JuliaConnectoR::juliaCall("RConnector.mainevalcmd", expr)
6. ├─base::tryCatch(...)
7. │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
8. │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
9. │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
10. └─JuliaConnectoR:::doCallJulia(funName, jlargs)
11. └─JuliaConnectoR:::handleCallbacksAndOutput()
[ FAIL 4 | WARN 0 | SKIP 7 | PASS 5 ]
Error: Test failures
Execution halted
Flavor: r-release-windows-x86_64
Version: 1.1.2
Check: tests
Result: ERROR
Running 'testthat.R' [268s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(jlmerclusterperm)
>
> test_check("jlmerclusterperm")
Julia Version 1.8.0
Commit 5544a0fab7 (2022-08-17 13:38 UTC)
Platform Info:
OS: Windows (x86_64-w64-mingw32)
CPU: 56 × Intel(R) Xeon(R) CPU E5-2680 v4 @ 2.40GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-13.0.1 (ORCJIT, broadwell)
Threads: 1 on 56 virtual cores
nothing
ℹ Starting Julia with 2 threads
✔ Starting Julia with 2 threads [7.4s]
ℹ Activating package environment
✔ Activating package environment [16.7s]
Status `C:\Users\CRAN\AppData\Local\R\cache\R\jlmerclusterperm\julia\Project.toml`
[a93c6f00] DataFrames v1.6.1
[31c24e10] Distributions v0.25.103
[38e38edf] GLM v1.9.0
[2a59065a] JlmerClusterPerm v0.1.1 `JlmerClusterPerm`
[ff71e718] MixedModels v4.22.2
[92933f4c] ProgressMeter v1.9.0
[74087812] Random123 v1.6.1
⌃ [2913bbd2] StatsBase v0.33.21
[3eaba693] StatsModels v0.7.3
[fd094767] Suppressor v0.2.6
[9a3f8284] Random
Info Packages marked with ⌃ have new versions available
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deps = ["InteractiveUtils", "Logging", "Random", "Serialization"]
uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
[[deps.TimeZones]]
deps = ["Artifacts", "Dates", "Downloads", "InlineStrings", "LazyArtifacts", "Mocking", "Printf", "RecipesBase", "Scratch", "TZJData", "Unicode", "p7zip_jll"]
git-tree-sha1 = "89e64d61ef3cd9e80f7fc12b7d13db2d75a23c03"
uuid = "f269a46b-ccf7-5d73-abea-4c690281aa53"
version = "1.13.0"
[[deps.TranscodingStreams]]
deps = ["Random", "Test"]
git-tree-sha1 = "9a6ae7ed916312b41236fcef7e0af564ef934769"
uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa"
version = "0.9.13"
[[deps.TypedTables]]
deps = ["Adapt", "Dictionaries", "Indexing", "SplitApplyCombine", "Tables", "Unicode"]
git-tree-sha1 = "d911ae4e642cf7d56b1165d29ef0a96ba3444ca9"
uuid = "9d95f2ec-7b3d-5a63-8d20-e2491e220bb9"
version = "1.4.3"
[[deps.UUIDs]]
deps = ["Random", "SHA"]
uuid = "cf7118a7-6976-5b1a-9a39-7adc72f591a4"
[[deps.Unicode]]
uuid = "4ec0a83e-493e-50e2-b9ac-8f72acf5a8f5"
[[deps.Zlib_jll]]
deps = ["Libdl"]
uuid = "83775a58-1f1d-513f-b197-d71354ab007a"
version = "1.2.12+3"
[[deps.Zstd_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "49ce682769cd5de6c72dcf1b94ed7790cd08974c"
uuid = "3161d3a3-bdf6-5164-811a-617609db77b4"
version = "1.5.5+0"
[[deps.libblastrampoline_jll]]
deps = ["Artifacts", "Libdl", "OpenBLAS_jll"]
uuid = "8e850b90-86db-534c-a0d3-1478176c7d93"
version = "5.1.1+0"
[[deps.nghttp2_jll]]
deps = ["Artifacts", "Libdl"]
uuid = "8e850ede-7688-5339-a07c-302acd2aaf8d"
version = "1.48.0+0"
[[deps.p7zip_jll]]
deps = ["Artifacts", "Libdl"]
uuid = "3f19e933-33d8-53b3-aaab-bd5110c3b7a0"
version = "17.4.0+0"
i Starting Julia with 2 threads
v Starting Julia with 2 threads [7s]
i Activating package environment
Precompiling project...
✓ JlmerClusterPerm
1 dependency successfully precompiled in 81 seconds. 110 already precompiled.
v Activating package environment [1m 30.5s]
i Running package setup scripts (1/11)
i Running package setup scripts (7/11)
i Running package setup scripts (9/11)
ERROR: LoadError: UndefVarError: ByRow not defined
Stacktrace:
[1] include
@ .\Base.jl:419 [inlined]
[2] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt64}}, source::Nothing)
@ Base .\loading.jl:1554
[3] top-level scope
@ stdin:1
in expression starting at C:\Users\CRAN\.julia\packages\DataFrames\58MUJ\src\DataFrames.jl:1
in expression starting at stdin:1
x Running package setup scripts (9/11) [58s]
ERROR: LoadError: UndefVarError: ByRow not defined
Stacktrace:
[1] include
@ .\Base.jl:419 [inlined]
[2] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt64}}, source::Nothing)
@ Base .\loading.jl:1554
[3] top-level scope
@ stdin:1
in expression starting at C:\Users\CRAN\.julia\packages\DataFrames\58MUJ\src\DataFrames.jl:1
in expression starting at stdin:1
[ FAIL 4 | WARN 0 | SKIP 7 | PASS 5 ]
══ Skipped tests (7) ═══════════════════════════════════════════════════════════
• On CRAN (7): 'test-jlmer.R:1:1', 'test-julia_rng.R:1:1',
'test-permute.R:1:1', 'test-progress.R:1:1', 'test-singularity.R:1:1',
'test-threshold_search.R:1:1', 'test-timewise_statistics.R:1:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-aaa-b-setup.R:11:3'): Setup with seed works (use 2 for testing) ──
Error: Evaluation in Julia failed.
Original Julia error message:
LoadError: Failed to precompile DataFrames [a93c6f00-e57d-5684-b7b6-d8193f3e46c0] to C:\Users\CRAN\.julia\compiled\v1.8\DataFrames\jl_C555.tmp.
Stacktrace:
[1] error(s::String)
@ Base .\error.jl:35
[2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool)
@ Base .\loading.jl:1705
[3] compilecache
@ .\loading.jl:1649 [inlined]
[4] _require(pkg::Base.PkgId)
@ Base .\loading.jl:1337
[5] _require_prelocked(uuidkey::Base.PkgId)
@ Base .\loading.jl:1200
[6] macro expansion
@ .\loading.jl:1180 [inlined]
[7] macro expansion
@ .\lock.jl:223 [inlined]
[8] require(into::Module, mod::Symbol)
@ Base .\loading.jl:1144
[9] eval
@ .\boot.jl:368 [inlined]
[10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
@ Base .\loading.jl:1428
[11] include_string (repeats 2 times)
@ .\loading.jl:1438 [inlined]
[12] mainevalcmd(str::String)
@ Main.RConnector D:\RCompile\CRANpkg\lib\4.2\JuliaConnectoR\Julia\evaluating.jl:150
[13] invokelatest(::Any, ::Any, ::Vararg{Any}; kwargs::Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Base .\essentials.jl:729
[14] invokelatest(::Any, ::Any, ::Vararg{Any})
@ Base .\essentials.jl:726
[15] evaluate!(call::Main.RConnector.Call, communicator::Main.RConnector.CommunicatoR{Sockets.TCPSocket})
@ Main.RConnector D:\RCompile\CRANpkg\lib\4.2\JuliaConnectoR\Julia\evaluating.jl:67
[16] evaluate_checked!(call::Main.RConnector.Call, communicator::Main.RConnector.CommunicatoR{Sockets.TCPSocket})
@ Main.RConnector D:\RCompile\CRANpkg\lib\4.2\JuliaConnectoR\Julia\evaluating.jl:55
[17] serve_repl(sock::Sockets.TCPSocket)
@ Main.RConnector D:\RCompile\CRANpkg\lib\4.2\JuliaConnectoR\Julia\communicating.jl:185
[18] (::Main.RConnector.var"#3#5")()
@ Main.RConnector .\task.jl:484
in expression starting at string:1
Backtrace:
▆
1. ├─testthat::expect_true(...) at test-aaa-b-setup.R:11:3
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─jlmerclusterperm::jlmerclusterperm_setup(...)
5. └─jlmerclusterperm:::setup_with_progress(...)
6. └─jlmerclusterperm:::source_jl(verbose = verbose)
7. └─JuliaConnectoR::juliaEval(jl_pkgs[i])
8. └─JuliaConnectoR::juliaCall("RConnector.mainevalcmd", expr)
9. ├─base::tryCatch(...)
10. │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
11. │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
12. │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
13. └─JuliaConnectoR:::doCallJulia(funName, jlargs)
14. └─JuliaConnectoR:::handleCallbacksAndOutput()
── Failure ('test-aaa-b-setup.R:17:3'): RNG initializes to seed=1 counter=0 ────
get_rng_seed() (`actual`) not equal to 1 (`expected`).
`actual` is NULL
`expected` is a double vector (1)
── Error ('test-aaa-b-setup.R:18:3'): RNG initializes to seed=1 counter=0 ──────
Error: Evaluation in Julia failed.
Original Julia error message:
LoadError: UndefVarError: rng not defined
Stacktrace:
[1] top-level scope
@ string:1
[2] eval
@ .\boot.jl:368 [inlined]
[3] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
@ Base .\loading.jl:1428
[4] include_string (repeats 2 times)
@ .\loading.jl:1438 [inlined]
[5] mainevalcmd(str::String)
@ Main.RConnector D:\RCompile\CRANpkg\lib\4.2\JuliaConnectoR\Julia\evaluating.jl:150
[6] invokelatest(::Any, ::Any, ::Vararg{Any}; kwargs::Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Base .\essentials.jl:729
[7] invokelatest(::Any, ::Any, ::Vararg{Any})
@ Base .\essentials.jl:726
[8] evaluate!(call::Main.RConnector.Call, communicator::Main.RConnector.CommunicatoR{Sockets.TCPSocket})
@ Main.RConnector D:\RCompile\CRANpkg\lib\4.2\JuliaConnectoR\Julia\evaluating.jl:67
[9] evaluate_checked!(call::Main.RConnector.Call, communicator::Main.RConnector.CommunicatoR{Sockets.TCPSocket})
@ Main.RConnector D:\RCompile\CRANpkg\lib\4.2\JuliaConnectoR\Julia\evaluating.jl:55
[10] serve_repl(sock::Sockets.TCPSocket)
@ Main.RConnector D:\RCompile\CRANpkg\lib\4.2\JuliaConnectoR\Julia\communicating.jl:185
[11] (::Main.RConnector.var"#3#5")()
@ Main.RConnector .\task.jl:484
in expression starting at string:1
Backtrace:
▆
1. ├─testthat::expect_equal(get_rng_state(), 0) at test-aaa-b-setup.R:18:3
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─jlmerclusterperm::get_rng_state()
5. └─JuliaConnectoR::juliaEval("Int(rng.ctr1)")
6. └─JuliaConnectoR::juliaCall("RConnector.mainevalcmd", expr)
7. ├─base::tryCatch(...)
8. │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
9. │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
10. │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
11. └─JuliaConnectoR:::doCallJulia(funName, jlargs)
12. └─JuliaConnectoR:::handleCallbacksAndOutput()
── Error ('test-clusterpermute.R:3:1'): (code run outside of `test_that()`) ────
Error: Evaluation in Julia failed.
Original Julia error message:
LoadError: Failed to precompile DataFrames [a93c6f00-e57d-5684-b7b6-d8193f3e46c0] to C:\Users\CRAN\.julia\compiled\v1.8\DataFrames\jl_EDE6.tmp.
Stacktrace:
[1] error(s::String)
@ Base .\error.jl:35
[2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool)
@ Base .\loading.jl:1705
[3] compilecache
@ .\loading.jl:1649 [inlined]
[4] _require(pkg::Base.PkgId)
@ Base .\loading.jl:1337
[5] _require_prelocked(uuidkey::Base.PkgId)
@ Base .\loading.jl:1200
[6] macro expansion
@ .\loading.jl:1180 [inlined]
[7] macro expansion
@ .\lock.jl:223 [inlined]
[8] require(into::Module, mod::Symbol)
@ Base .\loading.jl:1144
[9] eval
@ .\boot.jl:368 [inlined]
[10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
@ Base .\loading.jl:1428
[11] include_string (repeats 2 times)
@ .\loading.jl:1438 [inlined]
[12] mainevalcmd(str::String)
@ Main.RConnector D:\RCompile\CRANpkg\lib\4.2\JuliaConnectoR\Julia\evaluating.jl:150
[13] invokelatest(::Any, ::Any, ::Vararg{Any}; kwargs::Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Base .\essentials.jl:729
[14] invokelatest(::Any, ::Any, ::Vararg{Any})
@ Base .\essentials.jl:726
[15] evaluate!(call::Main.RConnector.Call, communicator::Main.RConnector.CommunicatoR{Sockets.TCPSocket})
@ Main.RConnector D:\RCompile\CRANpkg\lib\4.2\JuliaConnectoR\Julia\evaluating.jl:67
[16] evaluate_checked!(call::Main.RConnector.Call, communicator::Main.RConnector.CommunicatoR{Sockets.TCPSocket})
@ Main.RConnector D:\RCompile\CRANpkg\lib\4.2\JuliaConnectoR\Julia\evaluating.jl:55
[17] serve_repl(sock::Sockets.TCPSocket)
@ Main.RConnector D:\RCompile\CRANpkg\lib\4.2\JuliaConnectoR\Julia\communicating.jl:185
[18] (::Main.RConnector.var"#3#5")()
@ Main.RConnector .\task.jl:484
in expression starting at string:1
Backtrace:
▆
1. └─jlmerclusterperm::jlmerclusterperm_setup(restart = FALSE, verbose = FALSE) at test-clusterpermute.R:3:1
2. └─jlmerclusterperm:::setup_with_progress(...)
3. └─jlmerclusterperm:::source_jl(verbose = verbose)
4. └─JuliaConnectoR::juliaEval(jl_pkgs[i])
5. └─JuliaConnectoR::juliaCall("RConnector.mainevalcmd", expr)
6. ├─base::tryCatch(...)
7. │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
8. │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
9. │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
10. └─JuliaConnectoR:::doCallJulia(funName, jlargs)
11. └─JuliaConnectoR:::handleCallbacksAndOutput()
[ FAIL 4 | WARN 0 | SKIP 7 | PASS 5 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-windows-x86_64