Last updated on 2024-11-20 08:05:45 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.4.3 | 10.08 | 474.41 | 484.49 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.4.3 | 7.31 | 331.09 | 338.40 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.4.3 | 870.58 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 0.4.3 | 855.76 | ERROR | |||
| r-devel-windows-x86_64 | 0.4.3 | 12.00 | 625.00 | 637.00 | ERROR | |
| r-patched-linux-x86_64 | 0.4.3 | 12.95 | 469.18 | 482.13 | ERROR | |
| r-release-linux-x86_64 | 0.4.3 | 9.79 | 466.06 | 475.85 | ERROR | |
| r-release-macos-arm64 | 0.4.3 | 252.00 | OK | |||
| r-release-macos-x86_64 | 0.4.3 | 435.00 | OK | |||
| r-release-windows-x86_64 | 0.4.3 | 13.00 | 623.00 | 636.00 | ERROR | |
| r-oldrel-macos-arm64 | 0.4.3 | 255.00 | OK | |||
| r-oldrel-macos-x86_64 | 0.4.3 | 720.00 | OK | |||
| r-oldrel-windows-x86_64 | 0.4.3 | 16.00 | 755.00 | 771.00 | ERROR |
Version: 0.4.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘consistencychecking-3.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-3-1.png
1344x960 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 23949 bytes
Input file size = 24831 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20085
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 20078
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 18728
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 18662
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 18662
Output IDAT size = 18662 bytes (5287 bytes decrease)
Output file size = 18740 bytes (6091 bytes = 24.53% decrease)
--- finished re-building ‘consistencychecking-3.Rmd’
--- re-building ‘dataexploration-1.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-2-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 218046 bytes
Input file size = 218436 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
Output IDAT size = 160681 bytes (57365 bytes decrease)
Output file size = 160759 bytes (57677 bytes = 26.40% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-4-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 144160 bytes
Input file size = 144442 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
Output IDAT size = 108770 bytes (35390 bytes decrease)
Output file size = 108848 bytes (35594 bytes = 24.64% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 43024 bytes
Input file size = 43162 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
Output IDAT size = 34497 bytes (8527 bytes decrease)
Output file size = 34575 bytes (8587 bytes = 19.89% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34591 bytes
Input file size = 34717 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
Output IDAT size = 28108 bytes (6483 bytes decrease)
Output file size = 28186 bytes (6531 bytes = 18.81% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 157316 bytes
Input file size = 157622 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
Output IDAT size = 120267 bytes (37049 bytes decrease)
Output file size = 120345 bytes (37277 bytes = 23.65% decrease)
Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd)
Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘dataexploration-1.Rmd’
--- re-building ‘mbnmadose-overview.Rmd’ using rmarkdown
--- finished re-building ‘mbnmadose-overview.Rmd’
--- re-building ‘metaregression-6.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 73980 bytes
Input file size = 74166 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 68219
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66929
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66929
Output IDAT size = 66929 bytes (7051 bytes decrease)
Output file size = 67007 bytes (7159 bytes = 9.65% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 84126 bytes
Input file size = 84324 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 72400
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 72400
Output IDAT size = 72400 bytes (11726 bytes decrease)
Output file size = 72478 bytes (11846 bytes = 14.05% decrease)
--- finished re-building ‘metaregression-6.Rmd’
--- re-building ‘nma_in_mbnmadose.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/nma_in_mbnmadose_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16137 bytes
Input file size = 16227 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
Output IDAT size = 13294 bytes (2843 bytes decrease)
Output file size = 13372 bytes (2855 bytes = 17.59% decrease)
Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd)
Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘nma_in_mbnmadose.Rmd’
--- re-building ‘outputs-4.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 60569 bytes
Input file size = 60731 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 55897
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 54825
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 54825
Output IDAT size = 54825 bytes (5744 bytes decrease)
Output file size = 54903 bytes (5828 bytes = 9.60% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 59748 bytes
Input file size = 59910 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53446
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53446
Output IDAT size = 53446 bytes (6302 bytes decrease)
Output file size = 53524 bytes (6386 bytes = 10.66% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 65601 bytes
Input file size = 65775 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57331
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57331
Output IDAT size = 57331 bytes (8270 bytes decrease)
Output file size = 57409 bytes (8366 bytes = 12.72% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 114632 bytes
Input file size = 114866 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94978
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94978
Output IDAT size = 94978 bytes (19654 bytes decrease)
Output file size = 95056 bytes (19810 bytes = 17.25% decrease)
--- finished re-building ‘outputs-4.Rmd’
--- re-building ‘predictions-5.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 100393 bytes
Input file size = 100615 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85778
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85778
Output IDAT size = 85778 bytes (14615 bytes decrease)
Output file size = 85856 bytes (14759 bytes = 14.67% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 127996 bytes
Input file size = 128254 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103918
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103918
Output IDAT size = 103918 bytes (24078 bytes decrease)
Output file size = 103996 bytes (24258 bytes = 18.91% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 46783 bytes
Input file size = 46921 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42774
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42774
Output IDAT size = 42774 bytes (4009 bytes decrease)
Output file size = 42852 bytes (4069 bytes = 8.67% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 129022 bytes
Input file size = 129280 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99221
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99221
Output IDAT size = 99221 bytes (29801 bytes decrease)
Output file size = 99299 bytes (29981 bytes = 23.19% decrease)
--- finished re-building ‘predictions-5.Rmd’
--- re-building ‘runmbnmadose-2.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-13-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 101206 bytes
Input file size = 101428 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
Output IDAT size = 78412 bytes (22794 bytes decrease)
Output file size = 78490 bytes (22938 bytes = 22.62% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-14-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33742 bytes
Input file size = 33868 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
Output IDAT size = 26932 bytes (6810 bytes decrease)
Output file size = 27010 bytes (6858 bytes = 20.25% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34220 bytes
Input file size = 34346 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
Output IDAT size = 28128 bytes (6092 bytes decrease)
Output file size = 28206 bytes (6140 bytes = 17.88% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31005 bytes
Input file size = 31119 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
Output IDAT size = 25151 bytes (5854 bytes decrease)
Output file size = 25229 bytes (5890 bytes = 18.93% decrease)
Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd)
Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘runmbnmadose-2.Rmd’
SUMMARY: processing the following files failed:
‘dataexploration-1.Rmd’ ‘nma_in_mbnmadose.Rmd’ ‘runmbnmadose-2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.4.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘consistencychecking-3.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-3-1.png
1344x960 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 25152 bytes
Input file size = 26046 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20145
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 20125
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 18785
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 18720
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 18720
Output IDAT size = 18720 bytes (6432 bytes decrease)
Output file size = 18798 bytes (7248 bytes = 27.83% decrease)
--- finished re-building ‘consistencychecking-3.Rmd’
--- re-building ‘dataexploration-1.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-2-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 218046 bytes
Input file size = 218436 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
Output IDAT size = 160681 bytes (57365 bytes decrease)
Output file size = 160759 bytes (57677 bytes = 26.40% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-4-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 144160 bytes
Input file size = 144442 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
Output IDAT size = 108770 bytes (35390 bytes decrease)
Output file size = 108848 bytes (35594 bytes = 24.64% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 43024 bytes
Input file size = 43162 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
Output IDAT size = 34497 bytes (8527 bytes decrease)
Output file size = 34575 bytes (8587 bytes = 19.89% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34591 bytes
Input file size = 34717 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
Output IDAT size = 28108 bytes (6483 bytes decrease)
Output file size = 28186 bytes (6531 bytes = 18.81% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 157316 bytes
Input file size = 157622 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
Output IDAT size = 120267 bytes (37049 bytes decrease)
Output file size = 120345 bytes (37277 bytes = 23.65% decrease)
Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd)
Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘dataexploration-1.Rmd’
--- re-building ‘mbnmadose-overview.Rmd’ using rmarkdown
--- finished re-building ‘mbnmadose-overview.Rmd’
--- re-building ‘metaregression-6.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 73698 bytes
Input file size = 73872 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 68021
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66649
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66649
Output IDAT size = 66649 bytes (7049 bytes decrease)
Output file size = 66727 bytes (7145 bytes = 9.67% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 82860 bytes
Input file size = 83058 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 72232
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 72232
Output IDAT size = 72232 bytes (10628 bytes decrease)
Output file size = 72310 bytes (10748 bytes = 12.94% decrease)
--- finished re-building ‘metaregression-6.Rmd’
--- re-building ‘nma_in_mbnmadose.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/nma_in_mbnmadose_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16137 bytes
Input file size = 16227 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
Output IDAT size = 13294 bytes (2843 bytes decrease)
Output file size = 13372 bytes (2855 bytes = 17.59% decrease)
Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd)
Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘nma_in_mbnmadose.Rmd’
--- re-building ‘outputs-4.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 63164 bytes
Input file size = 63326 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57531
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 57009
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 57009
Output IDAT size = 57009 bytes (6155 bytes decrease)
Output file size = 57087 bytes (6239 bytes = 9.85% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 54946 bytes
Input file size = 55096 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 50252
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 50069
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 50069
Output IDAT size = 50069 bytes (4877 bytes decrease)
Output file size = 50147 bytes (4949 bytes = 8.98% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 51018 bytes
Input file size = 51168 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 47087
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 46452
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 46452
Output IDAT size = 46452 bytes (4566 bytes decrease)
Output file size = 46530 bytes (4638 bytes = 9.06% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 117932 bytes
Input file size = 118178 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 97378
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 97378
Output IDAT size = 97378 bytes (20554 bytes decrease)
Output file size = 97456 bytes (20722 bytes = 17.53% decrease)
--- finished re-building ‘outputs-4.Rmd’
--- re-building ‘predictions-5.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 99060 bytes
Input file size = 99282 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 83470
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 83470
Output IDAT size = 83470 bytes (15590 bytes decrease)
Output file size = 83548 bytes (15734 bytes = 15.85% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 127296 bytes
Input file size = 127554 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 101928
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 101928
Output IDAT size = 101928 bytes (25368 bytes decrease)
Output file size = 102006 bytes (25548 bytes = 20.03% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 46466 bytes
Input file size = 46604 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42412
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42412
Output IDAT size = 42412 bytes (4054 bytes decrease)
Output file size = 42490 bytes (4114 bytes = 8.83% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 129300 bytes
Input file size = 129558 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99256
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99256
Output IDAT size = 99256 bytes (30044 bytes decrease)
Output file size = 99334 bytes (30224 bytes = 23.33% decrease)
--- finished re-building ‘predictions-5.Rmd’
--- re-building ‘runmbnmadose-2.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-13-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 101206 bytes
Input file size = 101428 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
Output IDAT size = 78412 bytes (22794 bytes decrease)
Output file size = 78490 bytes (22938 bytes = 22.62% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-14-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33742 bytes
Input file size = 33868 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
Output IDAT size = 26932 bytes (6810 bytes decrease)
Output file size = 27010 bytes (6858 bytes = 20.25% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34220 bytes
Input file size = 34346 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
Output IDAT size = 28128 bytes (6092 bytes decrease)
Output file size = 28206 bytes (6140 bytes = 17.88% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31005 bytes
Input file size = 31119 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
Output IDAT size = 25151 bytes (5854 bytes decrease)
Output file size = 25229 bytes (5890 bytes = 18.93% decrease)
Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd)
Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘runmbnmadose-2.Rmd’
SUMMARY: processing the following files failed:
‘dataexploration-1.Rmd’ ‘nma_in_mbnmadose.Rmd’ ‘runmbnmadose-2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.4.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘consistencychecking-3.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-3-1.png
1344x960 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 27077 bytes
Input file size = 27971 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20203
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 20175
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 18481
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 18383
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 18383
Output IDAT size = 18383 bytes (8694 bytes decrease)
Output file size = 18461 bytes (9510 bytes = 34.00% decrease)
--- finished re-building ‘consistencychecking-3.Rmd’
--- re-building ‘dataexploration-1.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-2-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 218046 bytes
Input file size = 218436 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
Output IDAT size = 160681 bytes (57365 bytes decrease)
Output file size = 160759 bytes (57677 bytes = 26.40% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-4-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 144160 bytes
Input file size = 144442 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
Output IDAT size = 108770 bytes (35390 bytes decrease)
Output file size = 108848 bytes (35594 bytes = 24.64% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 43024 bytes
Input file size = 43162 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
Output IDAT size = 34497 bytes (8527 bytes decrease)
Output file size = 34575 bytes (8587 bytes = 19.89% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34591 bytes
Input file size = 34717 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
Output IDAT size = 28108 bytes (6483 bytes decrease)
Output file size = 28186 bytes (6531 bytes = 18.81% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 157316 bytes
Input file size = 157622 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
Output IDAT size = 120267 bytes (37049 bytes decrease)
Output file size = 120345 bytes (37277 bytes = 23.65% decrease)
Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd)
Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘dataexploration-1.Rmd’
--- re-building ‘mbnmadose-overview.Rmd’ using rmarkdown
--- finished re-building ‘mbnmadose-overview.Rmd’
--- re-building ‘metaregression-6.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 73803 bytes
Input file size = 73989 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 68254
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66767
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66767
Output IDAT size = 66767 bytes (7036 bytes decrease)
Output file size = 66845 bytes (7144 bytes = 9.66% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 84918 bytes
Input file size = 85116 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 73506
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 73506
Output IDAT size = 73506 bytes (11412 bytes decrease)
Output file size = 73584 bytes (11532 bytes = 13.55% decrease)
--- finished re-building ‘metaregression-6.Rmd’
--- re-building ‘nma_in_mbnmadose.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/nma_in_mbnmadose_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16137 bytes
Input file size = 16227 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
Output IDAT size = 13294 bytes (2843 bytes decrease)
Output file size = 13372 bytes (2855 bytes = 17.59% decrease)
Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd)
Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘nma_in_mbnmadose.Rmd’
--- re-building ‘outputs-4.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 62072 bytes
Input file size = 62234 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56899
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 55923
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 55923
Output IDAT size = 55923 bytes (6149 bytes decrease)
Output file size = 56001 bytes (6233 bytes = 10.02% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 64945 bytes
Input file size = 65107 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56752
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56752
Output IDAT size = 56752 bytes (8193 bytes decrease)
Output file size = 56830 bytes (8277 bytes = 12.71% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 60927 bytes
Input file size = 61089 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53923
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53923
Output IDAT size = 53923 bytes (7004 bytes decrease)
Output file size = 54001 bytes (7088 bytes = 11.60% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 114084 bytes
Input file size = 114318 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94314
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94314
Output IDAT size = 94314 bytes (19770 bytes decrease)
Output file size = 94392 bytes (19926 bytes = 17.43% decrease)
--- finished re-building ‘outputs-4.Rmd’
--- re-building ‘predictions-5.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 100516 bytes
Input file size = 100738 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85481
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85481
Output IDAT size = 85481 bytes (15035 bytes decrease)
Output file size = 85559 bytes (15179 bytes = 15.07% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 127534 bytes
Input file size = 127792 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103402
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103402
Output IDAT size = 103402 bytes (24132 bytes decrease)
Output file size = 103480 bytes (24312 bytes = 19.02% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 46848 bytes
Input file size = 46986 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42810
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42810
Output IDAT size = 42810 bytes (4038 bytes decrease)
Output file size = 42888 bytes (4098 bytes = 8.72% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 129077 bytes
Input file size = 129335 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99274
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99274
Output IDAT size = 99274 bytes (29803 bytes decrease)
Output file size = 99352 bytes (29983 bytes = 23.18% decrease)
--- finished re-building ‘predictions-5.Rmd’
--- re-building ‘runmbnmadose-2.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-13-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 101206 bytes
Input file size = 101428 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
Output IDAT size = 78412 bytes (22794 bytes decrease)
Output file size = 78490 bytes (22938 bytes = 22.62% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-14-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33742 bytes
Input file size = 33868 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
Output IDAT size = 26932 bytes (6810 bytes decrease)
Output file size = 27010 bytes (6858 bytes = 20.25% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34220 bytes
Input file size = 34346 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
Output IDAT size = 28128 bytes (6092 bytes decrease)
Output file size = 28206 bytes (6140 bytes = 17.88% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31005 bytes
Input file size = 31119 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
Output IDAT size = 25151 bytes (5854 bytes decrease)
Output file size = 25229 bytes (5890 bytes = 18.93% decrease)
Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd)
Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘runmbnmadose-2.Rmd’
SUMMARY: processing the following files failed:
‘dataexploration-1.Rmd’ ‘nma_in_mbnmadose.Rmd’ ‘runmbnmadose-2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.4.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘consistencychecking-3.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-3-1.png
1344x960 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 24724 bytes
Input file size = 25618 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20940
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 19962
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 19867
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 19867
Output IDAT size = 19867 bytes (4857 bytes decrease)
Output file size = 19945 bytes (5673 bytes = 22.14% decrease)
--- finished re-building ‘consistencychecking-3.Rmd’
--- re-building ‘dataexploration-1.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-2-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 218046 bytes
Input file size = 218436 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
Output IDAT size = 160681 bytes (57365 bytes decrease)
Output file size = 160759 bytes (57677 bytes = 26.40% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-4-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 144160 bytes
Input file size = 144442 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
Output IDAT size = 108770 bytes (35390 bytes decrease)
Output file size = 108848 bytes (35594 bytes = 24.64% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 43024 bytes
Input file size = 43162 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
Output IDAT size = 34497 bytes (8527 bytes decrease)
Output file size = 34575 bytes (8587 bytes = 19.89% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34591 bytes
Input file size = 34717 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
Output IDAT size = 28108 bytes (6483 bytes decrease)
Output file size = 28186 bytes (6531 bytes = 18.81% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 157316 bytes
Input file size = 157622 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
Output IDAT size = 120267 bytes (37049 bytes decrease)
Output file size = 120345 bytes (37277 bytes = 23.65% decrease)
Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd)
Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘dataexploration-1.Rmd’
--- re-building ‘mbnmadose-overview.Rmd’ using rmarkdown
--- finished re-building ‘mbnmadose-overview.Rmd’
--- re-building ‘metaregression-6.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 73597 bytes
Input file size = 73771 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 68068
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66608
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66608
Output IDAT size = 66608 bytes (6989 bytes decrease)
Output file size = 66686 bytes (7085 bytes = 9.60% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 84706 bytes
Input file size = 84904 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 73543
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 73543
Output IDAT size = 73543 bytes (11163 bytes decrease)
Output file size = 73621 bytes (11283 bytes = 13.29% decrease)
--- finished re-building ‘metaregression-6.Rmd’
--- re-building ‘nma_in_mbnmadose.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/nma_in_mbnmadose_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16137 bytes
Input file size = 16227 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
Output IDAT size = 13294 bytes (2843 bytes decrease)
Output file size = 13372 bytes (2855 bytes = 17.59% decrease)
Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd)
Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘nma_in_mbnmadose.Rmd’
--- re-building ‘outputs-4.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 61782 bytes
Input file size = 61944 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56655
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 55801
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 55801
Output IDAT size = 55801 bytes (5981 bytes decrease)
Output file size = 55879 bytes (6065 bytes = 9.79% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 60648 bytes
Input file size = 60810 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53650
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53650
Output IDAT size = 53650 bytes (6998 bytes decrease)
Output file size = 53728 bytes (7082 bytes = 11.65% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 61223 bytes
Input file size = 61385 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 54251
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 54251
Output IDAT size = 54251 bytes (6972 bytes decrease)
Output file size = 54329 bytes (7056 bytes = 11.49% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 114285 bytes
Input file size = 114519 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94775
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94775
Output IDAT size = 94775 bytes (19510 bytes decrease)
Output file size = 94853 bytes (19666 bytes = 17.17% decrease)
--- finished re-building ‘outputs-4.Rmd’
--- re-building ‘predictions-5.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 99599 bytes
Input file size = 99821 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 84879
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 84879
Output IDAT size = 84879 bytes (14720 bytes decrease)
Output file size = 84957 bytes (14864 bytes = 14.89% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 128166 bytes
Input file size = 128424 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103488
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103488
Output IDAT size = 103488 bytes (24678 bytes decrease)
Output file size = 103566 bytes (24858 bytes = 19.36% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 47199 bytes
Input file size = 47337 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 43174
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 43174
Output IDAT size = 43174 bytes (4025 bytes decrease)
Output file size = 43252 bytes (4085 bytes = 8.63% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 129120 bytes
Input file size = 129378 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99281
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99281
Output IDAT size = 99281 bytes (29839 bytes decrease)
Output file size = 99359 bytes (30019 bytes = 23.20% decrease)
--- finished re-building ‘predictions-5.Rmd’
--- re-building ‘runmbnmadose-2.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-13-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 101206 bytes
Input file size = 101428 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
Output IDAT size = 78412 bytes (22794 bytes decrease)
Output file size = 78490 bytes (22938 bytes = 22.62% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-14-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33742 bytes
Input file size = 33868 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
Output IDAT size = 26932 bytes (6810 bytes decrease)
Output file size = 27010 bytes (6858 bytes = 20.25% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34220 bytes
Input file size = 34346 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
Output IDAT size = 28128 bytes (6092 bytes decrease)
Output file size = 28206 bytes (6140 bytes = 17.88% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31005 bytes
Input file size = 31119 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
Output IDAT size = 25151 bytes (5854 bytes decrease)
Output file size = 25229 bytes (5890 bytes = 18.93% decrease)
Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd)
Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘runmbnmadose-2.Rmd’
SUMMARY: processing the following files failed:
‘dataexploration-1.Rmd’ ‘nma_in_mbnmadose.Rmd’ ‘runmbnmadose-2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.4.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'consistencychecking-3.Rmd' using rmarkdown
--- finished re-building 'consistencychecking-3.Rmd'
--- re-building 'dataexploration-1.Rmd' using rmarkdown
Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd)
Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building 'dataexploration-1.Rmd'
--- re-building 'mbnmadose-overview.Rmd' using rmarkdown
--- finished re-building 'mbnmadose-overview.Rmd'
--- re-building 'metaregression-6.Rmd' using rmarkdown
--- finished re-building 'metaregression-6.Rmd'
--- re-building 'nma_in_mbnmadose.Rmd' using rmarkdown
Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd)
Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building 'nma_in_mbnmadose.Rmd'
--- re-building 'outputs-4.Rmd' using rmarkdown
--- finished re-building 'outputs-4.Rmd'
--- re-building 'predictions-5.Rmd' using rmarkdown
--- finished re-building 'predictions-5.Rmd'
--- re-building 'runmbnmadose-2.Rmd' using rmarkdown
Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd)
Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building 'runmbnmadose-2.Rmd'
SUMMARY: processing the following files failed:
'dataexploration-1.Rmd' 'nma_in_mbnmadose.Rmd' 'runmbnmadose-2.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64
Version: 0.4.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘consistencychecking-3.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-3-1.png
1344x960 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 23748 bytes
Input file size = 24630 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19994
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 19988
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 18613
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 18539
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 18539
Output IDAT size = 18539 bytes (5209 bytes decrease)
Output file size = 18617 bytes (6013 bytes = 24.41% decrease)
--- finished re-building ‘consistencychecking-3.Rmd’
--- re-building ‘dataexploration-1.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-2-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 218046 bytes
Input file size = 218436 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
Output IDAT size = 160681 bytes (57365 bytes decrease)
Output file size = 160759 bytes (57677 bytes = 26.40% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-4-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 144160 bytes
Input file size = 144442 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
Output IDAT size = 108770 bytes (35390 bytes decrease)
Output file size = 108848 bytes (35594 bytes = 24.64% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 43024 bytes
Input file size = 43162 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
Output IDAT size = 34497 bytes (8527 bytes decrease)
Output file size = 34575 bytes (8587 bytes = 19.89% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34591 bytes
Input file size = 34717 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
Output IDAT size = 28108 bytes (6483 bytes decrease)
Output file size = 28186 bytes (6531 bytes = 18.81% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 157316 bytes
Input file size = 157622 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
Output IDAT size = 120267 bytes (37049 bytes decrease)
Output file size = 120345 bytes (37277 bytes = 23.65% decrease)
Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd)
Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘dataexploration-1.Rmd’
--- re-building ‘mbnmadose-overview.Rmd’ using rmarkdown
--- finished re-building ‘mbnmadose-overview.Rmd’
--- re-building ‘metaregression-6.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 73852 bytes
Input file size = 74038 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 68331
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66810
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66810
Output IDAT size = 66810 bytes (7042 bytes decrease)
Output file size = 66888 bytes (7150 bytes = 9.66% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 84109 bytes
Input file size = 84307 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 73445
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 73445
Output IDAT size = 73445 bytes (10664 bytes decrease)
Output file size = 73523 bytes (10784 bytes = 12.79% decrease)
--- finished re-building ‘metaregression-6.Rmd’
--- re-building ‘nma_in_mbnmadose.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/nma_in_mbnmadose_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16137 bytes
Input file size = 16227 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
Output IDAT size = 13294 bytes (2843 bytes decrease)
Output file size = 13372 bytes (2855 bytes = 17.59% decrease)
Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd)
Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘nma_in_mbnmadose.Rmd’
--- re-building ‘outputs-4.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 61414 bytes
Input file size = 61576 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56840
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 55436
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 55436
Output IDAT size = 55436 bytes (5978 bytes decrease)
Output file size = 55514 bytes (6062 bytes = 9.84% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 64790 bytes
Input file size = 64952 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56745
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56745
Output IDAT size = 56745 bytes (8045 bytes decrease)
Output file size = 56823 bytes (8129 bytes = 12.52% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 65373 bytes
Input file size = 65535 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57261
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57261
Output IDAT size = 57261 bytes (8112 bytes decrease)
Output file size = 57339 bytes (8196 bytes = 12.51% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 112536 bytes
Input file size = 112770 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 93681
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 93681
Output IDAT size = 93681 bytes (18855 bytes decrease)
Output file size = 93759 bytes (19011 bytes = 16.86% decrease)
--- finished re-building ‘outputs-4.Rmd’
--- re-building ‘predictions-5.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 100877 bytes
Input file size = 101099 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 86141
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 86141
Output IDAT size = 86141 bytes (14736 bytes decrease)
Output file size = 86219 bytes (14880 bytes = 14.72% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 129278 bytes
Input file size = 129536 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 105096
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 105096
Output IDAT size = 105096 bytes (24182 bytes decrease)
Output file size = 105174 bytes (24362 bytes = 18.81% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 46831 bytes
Input file size = 46969 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42874
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42874
Output IDAT size = 42874 bytes (3957 bytes decrease)
Output file size = 42952 bytes (4017 bytes = 8.55% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 129190 bytes
Input file size = 129448 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99265
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99265
Output IDAT size = 99265 bytes (29925 bytes decrease)
Output file size = 99343 bytes (30105 bytes = 23.26% decrease)
--- finished re-building ‘predictions-5.Rmd’
--- re-building ‘runmbnmadose-2.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-13-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 101206 bytes
Input file size = 101428 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
Output IDAT size = 78412 bytes (22794 bytes decrease)
Output file size = 78490 bytes (22938 bytes = 22.62% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-14-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33742 bytes
Input file size = 33868 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
Output IDAT size = 26932 bytes (6810 bytes decrease)
Output file size = 27010 bytes (6858 bytes = 20.25% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34220 bytes
Input file size = 34346 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
Output IDAT size = 28128 bytes (6092 bytes decrease)
Output file size = 28206 bytes (6140 bytes = 17.88% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31005 bytes
Input file size = 31119 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
Output IDAT size = 25151 bytes (5854 bytes decrease)
Output file size = 25229 bytes (5890 bytes = 18.93% decrease)
Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd)
Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘runmbnmadose-2.Rmd’
SUMMARY: processing the following files failed:
‘dataexploration-1.Rmd’ ‘nma_in_mbnmadose.Rmd’ ‘runmbnmadose-2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-patched-linux-x86_64
Version: 0.4.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘consistencychecking-3.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-3-1.png
1344x960 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 23534 bytes
Input file size = 24416 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20020
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 20004
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 18659
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 18597
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 18597
Output IDAT size = 18597 bytes (4937 bytes decrease)
Output file size = 18675 bytes (5741 bytes = 23.51% decrease)
--- finished re-building ‘consistencychecking-3.Rmd’
--- re-building ‘dataexploration-1.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-2-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 218046 bytes
Input file size = 218436 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
Output IDAT size = 160681 bytes (57365 bytes decrease)
Output file size = 160759 bytes (57677 bytes = 26.40% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-4-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 144160 bytes
Input file size = 144442 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
Output IDAT size = 108770 bytes (35390 bytes decrease)
Output file size = 108848 bytes (35594 bytes = 24.64% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 43024 bytes
Input file size = 43162 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
Output IDAT size = 34497 bytes (8527 bytes decrease)
Output file size = 34575 bytes (8587 bytes = 19.89% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34591 bytes
Input file size = 34717 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
Output IDAT size = 28108 bytes (6483 bytes decrease)
Output file size = 28186 bytes (6531 bytes = 18.81% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 157316 bytes
Input file size = 157622 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
Output IDAT size = 120267 bytes (37049 bytes decrease)
Output file size = 120345 bytes (37277 bytes = 23.65% decrease)
Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd)
Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘dataexploration-1.Rmd’
--- re-building ‘mbnmadose-overview.Rmd’ using rmarkdown
--- finished re-building ‘mbnmadose-overview.Rmd’
--- re-building ‘metaregression-6.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 73827 bytes
Input file size = 74013 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 68262
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66800
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66800
Output IDAT size = 66800 bytes (7027 bytes decrease)
Output file size = 66878 bytes (7135 bytes = 9.64% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 84241 bytes
Input file size = 84439 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 73150
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 73150
Output IDAT size = 73150 bytes (11091 bytes decrease)
Output file size = 73228 bytes (11211 bytes = 13.28% decrease)
--- finished re-building ‘metaregression-6.Rmd’
--- re-building ‘nma_in_mbnmadose.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/nma_in_mbnmadose_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16137 bytes
Input file size = 16227 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
Output IDAT size = 13294 bytes (2843 bytes decrease)
Output file size = 13372 bytes (2855 bytes = 17.59% decrease)
Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd)
Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘nma_in_mbnmadose.Rmd’
--- re-building ‘outputs-4.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 61048 bytes
Input file size = 61210 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56444
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 55156
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 55156
Output IDAT size = 55156 bytes (5892 bytes decrease)
Output file size = 55234 bytes (5976 bytes = 9.76% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 60512 bytes
Input file size = 60674 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53589
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53589
Output IDAT size = 53589 bytes (6923 bytes decrease)
Output file size = 53667 bytes (7007 bytes = 11.55% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 65918 bytes
Input file size = 66092 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57439
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57439
Output IDAT size = 57439 bytes (8479 bytes decrease)
Output file size = 57517 bytes (8575 bytes = 12.97% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 115530 bytes
Input file size = 115776 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 95750
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 95750
Output IDAT size = 95750 bytes (19780 bytes decrease)
Output file size = 95828 bytes (19948 bytes = 17.23% decrease)
--- finished re-building ‘outputs-4.Rmd’
--- re-building ‘predictions-5.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 99914 bytes
Input file size = 100136 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 84917
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 84917
Output IDAT size = 84917 bytes (14997 bytes decrease)
Output file size = 84995 bytes (15141 bytes = 15.12% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 128096 bytes
Input file size = 128354 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103417
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103417
Output IDAT size = 103417 bytes (24679 bytes decrease)
Output file size = 103495 bytes (24859 bytes = 19.37% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 46993 bytes
Input file size = 47131 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42863
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42863
Output IDAT size = 42863 bytes (4130 bytes decrease)
Output file size = 42941 bytes (4190 bytes = 8.89% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 129168 bytes
Input file size = 129426 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99221
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99221
Output IDAT size = 99221 bytes (29947 bytes decrease)
Output file size = 99299 bytes (30127 bytes = 23.28% decrease)
--- finished re-building ‘predictions-5.Rmd’
--- re-building ‘runmbnmadose-2.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-13-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 101206 bytes
Input file size = 101428 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
Output IDAT size = 78412 bytes (22794 bytes decrease)
Output file size = 78490 bytes (22938 bytes = 22.62% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-14-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33742 bytes
Input file size = 33868 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
Output IDAT size = 26932 bytes (6810 bytes decrease)
Output file size = 27010 bytes (6858 bytes = 20.25% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34220 bytes
Input file size = 34346 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
Output IDAT size = 28128 bytes (6092 bytes decrease)
Output file size = 28206 bytes (6140 bytes = 17.88% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31005 bytes
Input file size = 31119 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
Output IDAT size = 25151 bytes (5854 bytes decrease)
Output file size = 25229 bytes (5890 bytes = 18.93% decrease)
Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd)
Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘runmbnmadose-2.Rmd’
SUMMARY: processing the following files failed:
‘dataexploration-1.Rmd’ ‘nma_in_mbnmadose.Rmd’ ‘runmbnmadose-2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-linux-x86_64