Package required but not available: ‘arrow’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Running examples in ‘spatialGE-Ex.R’ failed
The error most likely occurred in:

> ### Name: STlist
> ### Title: STlist: Creation of STlist objects for spatial transcriptomics
> ###   analysis
> ### Aliases: STlist
> 
> ### ** Examples
> 
> 
> # Using included melanoma example (Thrane et al.)
> # Download example data set from spatialGE_Data
> thrane_tmp = tempdir()
> unlink(thrane_tmp, recursive=TRUE)
> dir.create(thrane_tmp)
> lk='https://github.com/FridleyLab/spatialGE_Data/raw/refs/heads/main/melanoma_thrane.zip?download='
> download.file(lk, destfile=paste0(thrane_tmp, '/', 'melanoma_thrane.zip'), mode='wb')
trying URL 'https://github.com/FridleyLab/spatialGE_Data/raw/refs/heads/main/melanoma_thrane.zip?download='
Warning in download.file(lk, destfile = paste0(thrane_tmp, "/", "melanoma_thrane.zip"),  :
  URL 'https://media.githubusercontent.com/media/FridleyLab/spatialGE_Data/refs/heads/main/melanoma_thrane.zip?download=true': status was 'SSL peer certificate or SSH remote key was not OK'
Error in download.file(lk, destfile = paste0(thrane_tmp, "/", "melanoma_thrane.zip"),  : 
  cannot open URL 'https://github.com/FridleyLab/spatialGE_Data/raw/refs/heads/main/melanoma_thrane.zip?download='
Execution halted
Running ‘testthat.R’ [5s/14s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # This file is part of the standard setup for testthat.
  > # It is recommended that you do not modify it.
  > #
  > # Where should you do additional test configuration?
  > # Learn more about the roles of various files in:
  > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
  > # * https://testthat.r-lib.org/articles/special-files.html
  > 
  > library(testthat)
  > library(spatialGE)
  > 
  > test_check("spatialGE")
  trying URL 'https://github.com/FridleyLab/spatialGE_Data/raw/refs/heads/main/melanoma_thrane.zip?download='
  [ FAIL 1 | WARN 1 | SKIP 0 | PASS 0 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-tests.R:9:1'): (code run outside of `test_that()`) ─────────────
  Error in `download.file("https://github.com/FridleyLab/spatialGE_Data/raw/refs/heads/main/melanoma_thrane.zip?download=", 
      destfile = paste0(thrane_tmp, "/", "melanoma_thrane.zip"), 
      mode = "wb")`: cannot open URL 'https://github.com/FridleyLab/spatialGE_Data/raw/refs/heads/main/melanoma_thrane.zip?download='
  Backtrace:
      ▆
   1. └─utils::download.file(...) at test-tests.R:9:1
  
  [ FAIL 1 | WARN 1 | SKIP 0 | PASS 0 ]
  Error: Test failures
  Execution halted
Error(s) in re-building vignettes:
--- re-building ‘basic_functions_vignette.Rmd’ using rmarkdown
trying URL 'https://github.com/FridleyLab/spatialGE_Data/raw/refs/heads/main/tnbc_bassiouni.zip?download='

Quitting from basic_functions_vignette.Rmd:75-83 [data_download]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `download.file()`:
! cannot open URL 'https://github.com/FridleyLab/spatialGE_Data/raw/refs/heads/main/tnbc_bassiouni.zip?download='
---
Backtrace:
    ▆
 1. └─utils::download.file(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'basic_functions_vignette.Rmd' failed with diagnostics:
cannot open URL 'https://github.com/FridleyLab/spatialGE_Data/raw/refs/heads/main/tnbc_bassiouni.zip?download='
--- failed re-building ‘basic_functions_vignette.Rmd’

SUMMARY: processing the following file failed:
  ‘basic_functions_vignette.Rmd’

Error: Vignette re-building failed.
Execution halted
Error(s) in re-building vignettes:
--- re-building ‘basic_functions_vignette.Rmd’ using rmarkdown
trying URL 'https://github.com/FridleyLab/spatialGE_Data/raw/refs/heads/main/tnbc_bassiouni.zip?download='

Quitting from basic_functions_vignette.Rmd:85-92 [data_download2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `download.file()`:
! cannot open URL 'https://github.com/FridleyLab/spatialGE_Data/raw/refs/heads/main/tnbc_bassiouni.zip?download='
---
Backtrace:
    ▆
 1. └─utils::download.file(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'basic_functions_vignette.Rmd' failed with diagnostics:
cannot open URL 'https://github.com/FridleyLab/spatialGE_Data/raw/refs/heads/main/tnbc_bassiouni.zip?download='
--- failed re-building ‘basic_functions_vignette.Rmd’

SUMMARY: processing the following file failed:
  ‘basic_functions_vignette.Rmd’

Error: Vignette re-building failed.
Execution halted