Running ‘testthat.R’ [35s/49s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(miRetrieve)
  > 
  > test_check("miRetrieve")
  [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-fitlda.R:35:5'): Tests that 'plot_lda_term' returns a plot ───
  `plot_lda` has type 'object', not 'list'.
  ── Failure ('test-jointargets.R:69:5'): Tests that targets can be plotted ──────
  typeof(plot_target) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:41:5'): Tests plotting scores ────────────────────
  typeof(plot_animal) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:42:5'): Tests plotting scores ────────────────────
  typeof(plot_patients) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:43:5'): Tests plotting scores ────────────────────
  typeof(plot_biomarker) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:44:5'): Tests plotting scores ────────────────────
  typeof(plot_own) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  
  [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ]
  Error: Test failures
  Execution halted
Running ‘testthat.R’ [23s/31s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(miRetrieve)
  > 
  > test_check("miRetrieve")
  [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-fitlda.R:35:5'): Tests that 'plot_lda_term' returns a plot ───
  `plot_lda` has type 'object', not 'list'.
  ── Failure ('test-jointargets.R:69:5'): Tests that targets can be plotted ──────
  typeof(plot_target) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:41:5'): Tests plotting scores ────────────────────
  typeof(plot_animal) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:42:5'): Tests plotting scores ────────────────────
  typeof(plot_patients) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:43:5'): Tests plotting scores ────────────────────
  typeof(plot_biomarker) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:44:5'): Tests plotting scores ────────────────────
  typeof(plot_own) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  
  [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ]
  Error: Test failures
  Execution halted
Running ‘testthat.R’ [61s/268s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(miRetrieve)
  > 
  > test_check("miRetrieve")
  [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-fitlda.R:35:5'): Tests that 'plot_lda_term' returns a plot ───
  `plot_lda` has type 'object', not 'list'.
  ── Failure ('test-jointargets.R:69:5'): Tests that targets can be plotted ──────
  typeof(plot_target) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:41:5'): Tests plotting scores ────────────────────
  typeof(plot_animal) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:42:5'): Tests plotting scores ────────────────────
  typeof(plot_patients) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:43:5'): Tests plotting scores ────────────────────
  typeof(plot_biomarker) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:44:5'): Tests plotting scores ────────────────────
  typeof(plot_own) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  
  [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ]
  Error: Test failures
  Execution halted
Running ‘testthat.R’ [56s/70s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(miRetrieve)
  > 
  > test_check("miRetrieve")
  [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-fitlda.R:35:5'): Tests that 'plot_lda_term' returns a plot ───
  `plot_lda` has type 'object', not 'list'.
  ── Failure ('test-jointargets.R:69:5'): Tests that targets can be plotted ──────
  typeof(plot_target) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:41:5'): Tests plotting scores ────────────────────
  typeof(plot_animal) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:42:5'): Tests plotting scores ────────────────────
  typeof(plot_patients) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:43:5'): Tests plotting scores ────────────────────
  typeof(plot_biomarker) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:44:5'): Tests plotting scores ────────────────────
  typeof(plot_own) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  
  [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ]
  Error: Test failures
  Execution halted
Running 'testthat.R' [28s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(miRetrieve)
  > 
  > test_check("miRetrieve")
  [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-fitlda.R:35:5'): Tests that 'plot_lda_term' returns a plot ───
  `plot_lda` has type 'object', not 'list'.
  ── Failure ('test-jointargets.R:69:5'): Tests that targets can be plotted ──────
  typeof(plot_target) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:41:5'): Tests plotting scores ────────────────────
  typeof(plot_animal) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:42:5'): Tests plotting scores ────────────────────
  typeof(plot_patients) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:43:5'): Tests plotting scores ────────────────────
  typeof(plot_biomarker) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:44:5'): Tests plotting scores ────────────────────
  typeof(plot_own) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  
  [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ]
  Error: Test failures
  Execution halted
Running ‘testthat.R’ [34s/44s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(miRetrieve)
  > 
  > test_check("miRetrieve")
  [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-fitlda.R:35:5'): Tests that 'plot_lda_term' returns a plot ───
  `plot_lda` has type 'object', not 'list'.
  ── Failure ('test-jointargets.R:69:5'): Tests that targets can be plotted ──────
  typeof(plot_target) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:41:5'): Tests plotting scores ────────────────────
  typeof(plot_animal) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:42:5'): Tests plotting scores ────────────────────
  typeof(plot_patients) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:43:5'): Tests plotting scores ────────────────────
  typeof(plot_biomarker) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:44:5'): Tests plotting scores ────────────────────
  typeof(plot_own) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  
  [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ]
  Error: Test failures
  Execution halted
Running ‘testthat.R’ [34s/44s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(miRetrieve)
  > 
  > test_check("miRetrieve")
  [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-fitlda.R:35:5'): Tests that 'plot_lda_term' returns a plot ───
  `plot_lda` has type 'object', not 'list'.
  ── Failure ('test-jointargets.R:69:5'): Tests that targets can be plotted ──────
  typeof(plot_target) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:41:5'): Tests plotting scores ────────────────────
  typeof(plot_animal) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:42:5'): Tests plotting scores ────────────────────
  typeof(plot_patients) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:43:5'): Tests plotting scores ────────────────────
  typeof(plot_biomarker) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:44:5'): Tests plotting scores ────────────────────
  typeof(plot_own) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  
  [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ]
  Error: Test failures
  Execution halted
Running 'testthat.R' [27s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(miRetrieve)
  > 
  > test_check("miRetrieve")
  [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-fitlda.R:35:5'): Tests that 'plot_lda_term' returns a plot ───
  `plot_lda` has type 'object', not 'list'.
  ── Failure ('test-jointargets.R:69:5'): Tests that targets can be plotted ──────
  typeof(plot_target) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:41:5'): Tests plotting scores ────────────────────
  typeof(plot_animal) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:42:5'): Tests plotting scores ────────────────────
  typeof(plot_patients) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:43:5'): Tests plotting scores ────────────────────
  typeof(plot_biomarker) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:44:5'): Tests plotting scores ────────────────────
  typeof(plot_own) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  
  [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ]
  Error: Test failures
  Execution halted
Running 'testthat.R' [38s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(miRetrieve)
  > 
  > test_check("miRetrieve")
  [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-fitlda.R:35:5'): Tests that 'plot_lda_term' returns a plot ───
  `plot_lda` has type 'object', not 'list'.
  ── Failure ('test-jointargets.R:69:5'): Tests that targets can be plotted ──────
  typeof(plot_target) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:41:5'): Tests plotting scores ────────────────────
  typeof(plot_animal) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:42:5'): Tests plotting scores ────────────────────
  typeof(plot_patients) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:43:5'): Tests plotting scores ────────────────────
  typeof(plot_biomarker) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  ── Failure ('test-plotscore.R:44:5'): Tests plotting scores ────────────────────
  typeof(plot_own) not equal to "list".
  1/1 mismatches
  x[1]: "object"
  y[1]: "list"
  
  [ FAIL 6 | WARN 15 | SKIP 0 | PASS 204 ]
  Error: Test failures
  Execution halted