Author field differs from that derived from Authors@R
  Author:    ‘Davis Weaver [aut, cre] (0000-0003-3086-497X)’
  Authors@R: ‘Davis Weaver [aut, cre] (orcid: 0000-0003-3086-497X)’
Running ‘testthat.R’ [47s/55s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(crosstalkr)
  > 
  > test_check("crosstalkr")
  [ FAIL 1 | WARN 7 | SKIP 12 | PASS 80 ]
  
  ══ Skipped tests (12) ══════════════════════════════════════════════════════════
  • On CRAN (6): 'test-filter.R:33:3', 'test-ppi_ingest.R:18:3',
    'test-ppi_ingest.R:26:3', 'test-ppi_ingest.R:32:3', 'test-utils.R:11:3',
    'test-utils.R:17:3'
  • relies on installed data (2): 'test-utils.R:52:3', 'test-utils.R:59:3'
  • relies on system file (2): 'test-calc_np.R:1:1',
    'test-node_suppression.R:1:1'
  • skipping due to long download times (2): 'test-ppi_ingest.R:3:3',
    'test-ppi_ingest.R:9:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-ppi_ingest.R:41:3'): to_taxon_id works for a variety of species ──
  Error in `open.connection(structure(4L, class = c("curl", "connection"), conn_id = <pointer: 0x5624b6db3c00>), 
      "rb")`: cannot open the connection
  Backtrace:
       ▆
    1. ├─testthat::expect_equal(...) at test-ppi_ingest.R:41:3
    2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
    3. │   └─rlang::eval_bare(expr, quo_get_env(quo))
    4. ├─crosstalkr::to_taxon_id("pseudomonas aeruginosa")
    5. │ └─crosstalkr::supported_species()
    6. │   └─readr::read_tsv(file = "https://stringdb-static.org/download/species.v11.5.txt")
    7. │     └─vroom::vroom(...)
    8. │       └─vroom:::vroom_(...)
    9. ├─base (local) `<fn>`(`<curl>`, "rb")
   10. └─base::open.connection(`<curl>`, "rb")
  
  [ FAIL 1 | WARN 7 | SKIP 12 | PASS 80 ]
  Error: Test failures
  Execution halted
Author field differs from that derived from Authors@R
  Author:    ‘Davis Weaver [aut, cre] (0000-0003-3086-497X)’
  Authors@R: ‘Davis Weaver [aut, cre] (orcid: 0000-0003-3086-497X)’
Running ‘testthat.R’ [28s/31s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(crosstalkr)
  > 
  > test_check("crosstalkr")
  [ FAIL 1 | WARN 7 | SKIP 12 | PASS 80 ]
  
  ══ Skipped tests (12) ══════════════════════════════════════════════════════════
  • On CRAN (6): 'test-filter.R:33:3', 'test-ppi_ingest.R:18:3',
    'test-ppi_ingest.R:26:3', 'test-ppi_ingest.R:32:3', 'test-utils.R:11:3',
    'test-utils.R:17:3'
  • relies on installed data (2): 'test-utils.R:52:3', 'test-utils.R:59:3'
  • relies on system file (2): 'test-calc_np.R:1:1',
    'test-node_suppression.R:1:1'
  • skipping due to long download times (2): 'test-ppi_ingest.R:3:3',
    'test-ppi_ingest.R:9:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-ppi_ingest.R:41:3'): to_taxon_id works for a variety of species ──
  Error in `open.connection(structure(4L, class = c("curl", "connection"), conn_id = <pointer: 0x55de397a3bc0>), 
      "rb")`: cannot open the connection
  Backtrace:
       ▆
    1. ├─testthat::expect_equal(...) at test-ppi_ingest.R:41:3
    2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
    3. │   └─rlang::eval_bare(expr, quo_get_env(quo))
    4. ├─crosstalkr::to_taxon_id("pseudomonas aeruginosa")
    5. │ └─crosstalkr::supported_species()
    6. │   └─readr::read_tsv(file = "https://stringdb-static.org/download/species.v11.5.txt")
    7. │     └─vroom::vroom(...)
    8. │       └─vroom:::vroom_(...)
    9. ├─base (local) `<fn>`(`<curl>`, "rb")
   10. └─base::open.connection(`<curl>`, "rb")
  
  [ FAIL 1 | WARN 7 | SKIP 12 | PASS 80 ]
  Error: Test failures
  Execution halted
Running ‘testthat.R’ [77s/327s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(crosstalkr)
  > 
  > test_check("crosstalkr")
  [ FAIL 1 | WARN 7 | SKIP 12 | PASS 80 ]
  
  ══ Skipped tests (12) ══════════════════════════════════════════════════════════
  • On CRAN (6): 'test-filter.R:33:3', 'test-ppi_ingest.R:18:3',
    'test-ppi_ingest.R:26:3', 'test-ppi_ingest.R:32:3', 'test-utils.R:11:3',
    'test-utils.R:17:3'
  • relies on installed data (2): 'test-utils.R:52:3', 'test-utils.R:59:3'
  • relies on system file (2): 'test-calc_np.R:1:1',
    'test-node_suppression.R:1:1'
  • skipping due to long download times (2): 'test-ppi_ingest.R:3:3',
    'test-ppi_ingest.R:9:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-ppi_ingest.R:41:3'): to_taxon_id works for a variety of species ──
  Error in `open.connection(structure(4L, class = c("curl", "connection"), conn_id = <pointer: 0x55dc615b2d60>), 
      "rb")`: cannot open the connection
  Backtrace:
       ▆
    1. ├─testthat::expect_equal(...) at test-ppi_ingest.R:41:3
    2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
    3. │   └─rlang::eval_bare(expr, quo_get_env(quo))
    4. ├─crosstalkr::to_taxon_id("pseudomonas aeruginosa")
    5. │ └─crosstalkr::supported_species()
    6. │   └─readr::read_tsv(file = "https://stringdb-static.org/download/species.v11.5.txt")
    7. │     └─vroom::vroom(...)
    8. │       └─vroom:::vroom_(...)
    9. ├─base (local) `<fn>`(`<curl>`, "rb")
   10. └─base::open.connection(`<curl>`, "rb")
  
  [ FAIL 1 | WARN 7 | SKIP 12 | PASS 80 ]
  Error: Test failures
  Execution halted
Running ‘testthat.R’ [74s/91s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(crosstalkr)
  > 
  > test_check("crosstalkr")
  [ FAIL 1 | WARN 7 | SKIP 12 | PASS 80 ]
  
  ══ Skipped tests (12) ══════════════════════════════════════════════════════════
  • On CRAN (6): 'test-filter.R:33:3', 'test-ppi_ingest.R:18:3',
    'test-ppi_ingest.R:26:3', 'test-ppi_ingest.R:32:3', 'test-utils.R:11:3',
    'test-utils.R:17:3'
  • relies on installed data (2): 'test-utils.R:52:3', 'test-utils.R:59:3'
  • relies on system file (2): 'test-calc_np.R:1:1',
    'test-node_suppression.R:1:1'
  • skipping due to long download times (2): 'test-ppi_ingest.R:3:3',
    'test-ppi_ingest.R:9:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-ppi_ingest.R:41:3'): to_taxon_id works for a variety of species ──
  Error in `open.connection(structure(4L, class = c("curl", "connection"), conn_id = <pointer: 0x1c8e52b0>), 
      "rb")`: cannot open the connection
  Backtrace:
       ▆
    1. ├─testthat::expect_equal(...) at test-ppi_ingest.R:41:3
    2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
    3. │   └─rlang::eval_bare(expr, quo_get_env(quo))
    4. ├─crosstalkr::to_taxon_id("pseudomonas aeruginosa")
    5. │ └─crosstalkr::supported_species()
    6. │   └─readr::read_tsv(file = "https://stringdb-static.org/download/species.v11.5.txt")
    7. │     └─vroom::vroom(...)
    8. │       └─vroom:::vroom_(...)
    9. ├─base (local) `<fn>`(`<curl>`, "rb")
   10. └─base::open.connection(`<curl>`, "rb")
  
  [ FAIL 1 | WARN 7 | SKIP 12 | PASS 80 ]
  Error: Test failures
  Execution halted
Running 'testthat.R' [38s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(crosstalkr)
  > 
  > test_check("crosstalkr")
  [ FAIL 1 | WARN 7 | SKIP 12 | PASS 80 ]
  
  ══ Skipped tests (12) ══════════════════════════════════════════════════════════
  • On CRAN (6): 'test-filter.R:33:3', 'test-ppi_ingest.R:18:3',
    'test-ppi_ingest.R:26:3', 'test-ppi_ingest.R:32:3', 'test-utils.R:11:3',
    'test-utils.R:17:3'
  • relies on installed data (2): 'test-utils.R:52:3', 'test-utils.R:59:3'
  • relies on system file (2): 'test-calc_np.R:1:1',
    'test-node_suppression.R:1:1'
  • skipping due to long download times (2): 'test-ppi_ingest.R:3:3',
    'test-ppi_ingest.R:9:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-ppi_ingest.R:41:3'): to_taxon_id works for a variety of species ──
  Error in `open.connection(structure(4L, class = c("curl", "connection"), conn_id = <pointer: 0x000002381d9ee340>), 
      "rb")`: cannot open the connection
  Backtrace:
       ▆
    1. ├─testthat::expect_equal(...) at test-ppi_ingest.R:41:3
    2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
    3. │   └─rlang::eval_bare(expr, quo_get_env(quo))
    4. ├─crosstalkr::to_taxon_id("pseudomonas aeruginosa")
    5. │ └─crosstalkr::supported_species()
    6. │   └─readr::read_tsv(file = "https://stringdb-static.org/download/species.v11.5.txt")
    7. │     └─vroom::vroom(...)
    8. │       └─vroom:::vroom_(...)
    9. ├─base (local) `<fn>`(`<curl>`, "rb")
   10. └─base::open.connection(`<curl>`, "rb")
  
  [ FAIL 1 | WARN 7 | SKIP 12 | PASS 80 ]
  Error: Test failures
  Execution halted
Running ‘testthat.R’ [49s/68s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(crosstalkr)
  > 
  > test_check("crosstalkr")
  [ FAIL 1 | WARN 7 | SKIP 12 | PASS 80 ]
  
  ══ Skipped tests (12) ══════════════════════════════════════════════════════════
  • On CRAN (6): 'test-filter.R:33:3', 'test-ppi_ingest.R:18:3',
    'test-ppi_ingest.R:26:3', 'test-ppi_ingest.R:32:3', 'test-utils.R:11:3',
    'test-utils.R:17:3'
  • relies on installed data (2): 'test-utils.R:52:3', 'test-utils.R:59:3'
  • relies on system file (2): 'test-calc_np.R:1:1',
    'test-node_suppression.R:1:1'
  • skipping due to long download times (2): 'test-ppi_ingest.R:3:3',
    'test-ppi_ingest.R:9:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-ppi_ingest.R:41:3'): to_taxon_id works for a variety of species ──
  Error in `open.connection(structure(4L, class = c("curl", "connection"), conn_id = <pointer: 0x55836a6de9f0>), 
      "rb")`: cannot open the connection
  Backtrace:
       ▆
    1. ├─testthat::expect_equal(...) at test-ppi_ingest.R:41:3
    2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
    3. │   └─rlang::eval_bare(expr, quo_get_env(quo))
    4. ├─crosstalkr::to_taxon_id("pseudomonas aeruginosa")
    5. │ └─crosstalkr::supported_species()
    6. │   └─readr::read_tsv(file = "https://stringdb-static.org/download/species.v11.5.txt")
    7. │     └─vroom::vroom(...)
    8. │       └─vroom:::vroom_(...)
    9. ├─base (local) `<fn>`(`<curl>`, "rb")
   10. └─base::open.connection(`<curl>`, "rb")
  
  [ FAIL 1 | WARN 7 | SKIP 12 | PASS 80 ]
  Error: Test failures
  Execution halted
Running ‘testthat.R’ [50s/70s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(crosstalkr)
  > 
  > test_check("crosstalkr")
  [ FAIL 1 | WARN 7 | SKIP 12 | PASS 80 ]
  
  ══ Skipped tests (12) ══════════════════════════════════════════════════════════
  • On CRAN (6): 'test-filter.R:33:3', 'test-ppi_ingest.R:18:3',
    'test-ppi_ingest.R:26:3', 'test-ppi_ingest.R:32:3', 'test-utils.R:11:3',
    'test-utils.R:17:3'
  • relies on installed data (2): 'test-utils.R:52:3', 'test-utils.R:59:3'
  • relies on system file (2): 'test-calc_np.R:1:1',
    'test-node_suppression.R:1:1'
  • skipping due to long download times (2): 'test-ppi_ingest.R:3:3',
    'test-ppi_ingest.R:9:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-ppi_ingest.R:41:3'): to_taxon_id works for a variety of species ──
  Error in `open.connection(structure(4L, class = c("curl", "connection"), conn_id = <pointer: 0x55c374e83550>), 
      "rb")`: cannot open the connection
  Backtrace:
       ▆
    1. ├─testthat::expect_equal(...) at test-ppi_ingest.R:41:3
    2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
    3. │   └─rlang::eval_bare(expr, quo_get_env(quo))
    4. ├─crosstalkr::to_taxon_id("pseudomonas aeruginosa")
    5. │ └─crosstalkr::supported_species()
    6. │   └─readr::read_tsv(file = "https://stringdb-static.org/download/species.v11.5.txt")
    7. │     └─vroom::vroom(...)
    8. │       └─vroom:::vroom_(...)
    9. ├─base (local) `<fn>`(`<curl>`, "rb")
   10. └─base::open.connection(`<curl>`, "rb")
  
  [ FAIL 1 | WARN 7 | SKIP 12 | PASS 80 ]
  Error: Test failures
  Execution halted
Running 'testthat.R' [38s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(crosstalkr)
  > 
  > test_check("crosstalkr")
  [ FAIL 1 | WARN 7 | SKIP 12 | PASS 80 ]
  
  ══ Skipped tests (12) ══════════════════════════════════════════════════════════
  • On CRAN (6): 'test-filter.R:33:3', 'test-ppi_ingest.R:18:3',
    'test-ppi_ingest.R:26:3', 'test-ppi_ingest.R:32:3', 'test-utils.R:11:3',
    'test-utils.R:17:3'
  • relies on installed data (2): 'test-utils.R:52:3', 'test-utils.R:59:3'
  • relies on system file (2): 'test-calc_np.R:1:1',
    'test-node_suppression.R:1:1'
  • skipping due to long download times (2): 'test-ppi_ingest.R:3:3',
    'test-ppi_ingest.R:9:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-ppi_ingest.R:41:3'): to_taxon_id works for a variety of species ──
  Error in `open.connection(structure(4L, class = c("curl", "connection"), conn_id = <pointer: 0x000001859acef800>), 
      "rb")`: cannot open the connection
  Backtrace:
       ▆
    1. ├─testthat::expect_equal(...) at test-ppi_ingest.R:41:3
    2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
    3. │   └─rlang::eval_bare(expr, quo_get_env(quo))
    4. ├─crosstalkr::to_taxon_id("pseudomonas aeruginosa")
    5. │ └─crosstalkr::supported_species()
    6. │   └─readr::read_tsv(file = "https://stringdb-static.org/download/species.v11.5.txt")
    7. │     └─vroom::vroom(...)
    8. │       └─vroom:::vroom_(...)
    9. ├─base (local) `<fn>`(`<curl>`, "rb")
   10. └─base::open.connection(`<curl>`, "rb")
  
  [ FAIL 1 | WARN 7 | SKIP 12 | PASS 80 ]
  Error: Test failures
  Execution halted
Package suggested but not available for checking: ‘EnsDb.Hsapiens.v86’
Package suggested but not available for checking: ‘EnsDb.Hsapiens.v86’
Running 'testthat.R' [59s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(crosstalkr)
  > 
  > test_check("crosstalkr")
  [ FAIL 1 | WARN 7 | SKIP 12 | PASS 80 ]
  
  ══ Skipped tests (12) ══════════════════════════════════════════════════════════
  • On CRAN (6): 'test-filter.R:33:3', 'test-ppi_ingest.R:18:3',
    'test-ppi_ingest.R:26:3', 'test-ppi_ingest.R:32:3', 'test-utils.R:11:3',
    'test-utils.R:17:3'
  • relies on installed data (2): 'test-utils.R:52:3', 'test-utils.R:59:3'
  • relies on system file (2): 'test-calc_np.R:1:1',
    'test-node_suppression.R:1:1'
  • skipping due to long download times (2): 'test-ppi_ingest.R:3:3',
    'test-ppi_ingest.R:9:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-ppi_ingest.R:41:3'): to_taxon_id works for a variety of species ──
  Error in `open.connection(structure(4L, class = c("curl", "connection"), conn_id = <pointer: 0x000002138efe6a60>), 
      "rb")`: cannot open the connection
  Backtrace:
       ▆
    1. ├─testthat::expect_equal(...) at test-ppi_ingest.R:41:3
    2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
    3. │   └─rlang::eval_bare(expr, quo_get_env(quo))
    4. ├─crosstalkr::to_taxon_id("pseudomonas aeruginosa")
    5. │ └─crosstalkr::supported_species()
    6. │   └─readr::read_tsv(file = "https://stringdb-static.org/download/species.v11.5.txt")
    7. │     └─vroom::vroom(...)
    8. │       └─vroom:::vroom_(...)
    9. ├─base (local) `<fn>`(`<curl>`, "rb")
   10. └─base::open.connection(`<curl>`, "rb")
  
  [ FAIL 1 | WARN 7 | SKIP 12 | PASS 80 ]
  Error: Test failures
  Execution halted