Maintainer: ‘Pedro Bittencourt <pedro.sennabittencourt@gmail.com>’

Additional repositories with no packages:
  https://r-forge.r-project.org/
Running examples in ‘delimtools-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: match_ratio
> ### Title: Compute Agreement Between Alternative Species Delimitation
> ###   Partitions
> ### Aliases: match_ratio
> 
> ### ** Examples
> 
> 
> # estimate match ratio statistics
> match_ratio(geophagus_delims)
Error in `purrr::map()`:
ℹ In index: 1.
Caused by error in `dplyr::mutate()`:
ℹ In argument: `n_match = dplyr::if_else(dplyr::pick(2) ==
  dplyr::pick(3), union, 0)`.
Caused by error in `dplyr::if_else()`:
! `condition` must be a logical vector, not a logical matrix.
Backtrace:
     ▆
  1. ├─delimtools::match_ratio(geophagus_delims)
  2. │ ├─dplyr::ungroup(...)
  3. │ ├─dplyr::arrange(...)
  4. │ ├─dplyr::group_by(...)
  5. │ ├─purrr::list_rbind(...)
  6. │ │ └─purrr:::check_list_of_data_frames(x)
  7. │ │   └─vctrs::obj_check_list(x, call = error_call)
  8. │ ├─rlang::set_names(...)
  9. │ └─purrr::map(...)
 10. │   └─purrr:::map_("list", .x, .f, ..., .progress = .progress)
 11. │     ├─purrr:::with_indexed_errors(...)
 12. │     │ └─base::withCallingHandlers(...)
 13. │     ├─purrr:::call_with_cleanup(...)
 14. │     └─delimtools (local) .f(.x[[i]], ...)
 15. │       ├─dplyr::summarise(...)
 16. │       ├─dplyr::mutate(...)
 17. │       └─dplyr:::mutate.data.frame(...)
 18. │         └─dplyr:::mutate_cols(.data, dplyr_quosures(...), by)
 19. │           ├─base::withCallingHandlers(...)
 20. │           └─dplyr:::mutate_col(dots[[i]], data, mask, new_columns)
 21. │             └─mask$eval_all_mutate(quo)
 22. │               └─dplyr (local) eval()
 23. ├─dplyr::if_else(...)
 24. │ └─vctrs::vec_if_else(...)
 25. └─rlang::abort(message = message, call = call)
Execution halted
Examples with CPU (user + system) or elapsed time > 5s
                user system elapsed
delim_autoplot 4.138  0.067   6.714
Running examples in ‘delimtools-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: match_ratio
> ### Title: Compute Agreement Between Alternative Species Delimitation
> ###   Partitions
> ### Aliases: match_ratio
> 
> ### ** Examples
> 
> 
> # estimate match ratio statistics
> match_ratio(geophagus_delims)
Error in `purrr::map()`:
ℹ In index: 1.
Caused by error in `dplyr::mutate()`:
ℹ In argument: `n_match = dplyr::if_else(dplyr::pick(2) ==
  dplyr::pick(3), union, 0)`.
Caused by error in `dplyr::if_else()`:
! `condition` must be a logical vector, not a logical matrix.
Backtrace:
     ▆
  1. ├─delimtools::match_ratio(geophagus_delims)
  2. │ ├─dplyr::ungroup(...)
  3. │ ├─dplyr::arrange(...)
  4. │ ├─dplyr::group_by(...)
  5. │ ├─purrr::list_rbind(...)
  6. │ │ └─purrr:::check_list_of_data_frames(x)
  7. │ │   └─vctrs::obj_check_list(x, call = error_call)
  8. │ ├─rlang::set_names(...)
  9. │ └─purrr::map(...)
 10. │   └─purrr:::map_("list", .x, .f, ..., .progress = .progress)
 11. │     ├─purrr:::with_indexed_errors(...)
 12. │     │ └─base::withCallingHandlers(...)
 13. │     ├─purrr:::call_with_cleanup(...)
 14. │     └─delimtools (local) .f(.x[[i]], ...)
 15. │       ├─dplyr::summarise(...)
 16. │       ├─dplyr::mutate(...)
 17. │       └─dplyr:::mutate.data.frame(...)
 18. │         └─dplyr:::mutate_cols(.data, dplyr_quosures(...), by)
 19. │           ├─base::withCallingHandlers(...)
 20. │           └─dplyr:::mutate_col(dots[[i]], data, mask, new_columns)
 21. │             └─mask$eval_all_mutate(quo)
 22. │               └─dplyr (local) eval()
 23. ├─dplyr::if_else(...)
 24. │ └─vctrs::vec_if_else(...)
 25. └─rlang::abort(message = message, call = call)
Execution halted
Running examples in ‘delimtools-Ex.R’ failed
The error most likely occurred in:

> ### Name: match_ratio
> ### Title: Compute Agreement Between Alternative Species Delimitation
> ###   Partitions
> ### Aliases: match_ratio
> 
> ### ** Examples
> 
> 
> # estimate match ratio statistics
> match_ratio(geophagus_delims)
Error in `purrr::map()`:
ℹ In index: 1.
Caused by error in `dplyr::mutate()`:
ℹ In argument: `n_match = dplyr::if_else(dplyr::pick(2) ==
  dplyr::pick(3), union, 0)`.
Caused by error in `dplyr::if_else()`:
! `condition` must be a logical vector, not a logical matrix.
Backtrace:
     ▆
  1. ├─delimtools::match_ratio(geophagus_delims)
  2. │ ├─dplyr::ungroup(...)
  3. │ ├─dplyr::arrange(...)
  4. │ ├─dplyr::group_by(...)
  5. │ ├─purrr::list_rbind(...)
  6. │ │ └─purrr:::check_list_of_data_frames(x)
  7. │ │   └─vctrs::obj_check_list(x, call = error_call)
  8. │ ├─rlang::set_names(...)
  9. │ └─purrr::map(...)
 10. │   └─purrr:::map_("list", .x, .f, ..., .progress = .progress)
 11. │     ├─purrr:::with_indexed_errors(...)
 12. │     │ └─base::withCallingHandlers(...)
 13. │     ├─purrr:::call_with_cleanup(...)
 14. │     └─delimtools (local) .f(.x[[i]], ...)
 15. │       ├─dplyr::summarise(...)
 16. │       ├─dplyr::mutate(...)
 17. │       └─dplyr:::mutate.data.frame(...)
 18. │         └─dplyr:::mutate_cols(.data, dplyr_quosures(...), by)
 19. │           ├─base::withCallingHandlers(...)
 20. │           └─dplyr:::mutate_col(dots[[i]], data, mask, new_columns)
 21. │             └─mask$eval_all_mutate(quo)
 22. │               └─dplyr (local) eval()
 23. ├─dplyr::if_else(...)
 24. │ └─vctrs::vec_if_else(...)
 25. └─rlang::abort(message = message, call = call)
Execution halted
Running examples in ‘delimtools-Ex.R’ failed
The error most likely occurred in:

> ### Name: match_ratio
> ### Title: Compute Agreement Between Alternative Species Delimitation
> ###   Partitions
> ### Aliases: match_ratio
> 
> ### ** Examples
> 
> 
> # estimate match ratio statistics
> match_ratio(geophagus_delims)
Error in `purrr::map()`:
ℹ In index: 1.
Caused by error in `dplyr::mutate()`:
ℹ In argument: `n_match = dplyr::if_else(dplyr::pick(2) ==
  dplyr::pick(3), union, 0)`.
Caused by error in `dplyr::if_else()`:
! `condition` must be a logical vector, not a logical matrix.
Backtrace:
     ▆
  1. ├─delimtools::match_ratio(geophagus_delims)
  2. │ ├─dplyr::ungroup(...)
  3. │ ├─dplyr::arrange(...)
  4. │ ├─dplyr::group_by(...)
  5. │ ├─purrr::list_rbind(...)
  6. │ │ └─purrr:::check_list_of_data_frames(x)
  7. │ │   └─vctrs::obj_check_list(x, call = error_call)
  8. │ ├─rlang::set_names(...)
  9. │ └─purrr::map(...)
 10. │   └─purrr:::map_("list", .x, .f, ..., .progress = .progress)
 11. │     ├─purrr:::with_indexed_errors(...)
 12. │     │ └─base::withCallingHandlers(...)
 13. │     ├─purrr:::call_with_cleanup(...)
 14. │     └─delimtools (local) .f(.x[[i]], ...)
 15. │       ├─dplyr::summarise(...)
 16. │       ├─dplyr::mutate(...)
 17. │       └─dplyr:::mutate.data.frame(...)
 18. │         └─dplyr:::mutate_cols(.data, dplyr_quosures(...), by)
 19. │           ├─base::withCallingHandlers(...)
 20. │           └─dplyr:::mutate_col(dots[[i]], data, mask, new_columns)
 21. │             └─mask$eval_all_mutate(quo)
 22. │               └─dplyr (local) eval()
 23. ├─dplyr::if_else(...)
 24. │ └─vctrs::vec_if_else(...)
 25. └─rlang::abort(message = message, call = call)
Execution halted
Running examples in 'delimtools-Ex.R' failed
The error most likely occurred in:

> ### Name: match_ratio
> ### Title: Compute Agreement Between Alternative Species Delimitation
> ###   Partitions
> ### Aliases: match_ratio
> 
> ### ** Examples
> 
> 
> # estimate match ratio statistics
> match_ratio(geophagus_delims)
Error in `purrr::map()`:
ℹ In index: 1.
Caused by error in `dplyr::mutate()`:
ℹ In argument: `n_match = dplyr::if_else(dplyr::pick(2) ==
  dplyr::pick(3), union, 0)`.
Caused by error in `dplyr::if_else()`:
! `condition` must be a logical vector, not a logical matrix.
Backtrace:
     ▆
  1. ├─delimtools::match_ratio(geophagus_delims)
  2. │ ├─dplyr::ungroup(...)
  3. │ ├─dplyr::arrange(...)
  4. │ ├─dplyr::group_by(...)
  5. │ ├─purrr::list_rbind(...)
  6. │ │ └─purrr:::check_list_of_data_frames(x)
  7. │ │   └─vctrs::obj_check_list(x, call = error_call)
  8. │ ├─rlang::set_names(...)
  9. │ └─purrr::map(...)
 10. │   └─purrr:::map_("list", .x, .f, ..., .progress = .progress)
 11. │     ├─purrr:::with_indexed_errors(...)
 12. │     │ └─base::withCallingHandlers(...)
 13. │     ├─purrr:::call_with_cleanup(...)
 14. │     └─delimtools (local) .f(.x[[i]], ...)
 15. │       ├─dplyr::summarise(...)
 16. │       ├─dplyr::mutate(...)
 17. │       └─dplyr:::mutate.data.frame(...)
 18. │         └─dplyr:::mutate_cols(.data, dplyr_quosures(...), by)
 19. │           ├─base::withCallingHandlers(...)
 20. │           └─dplyr:::mutate_col(dots[[i]], data, mask, new_columns)
 21. │             └─mask$eval_all_mutate(quo)
 22. │               └─dplyr (local) eval()
 23. ├─dplyr::if_else(...)
 24. │ └─vctrs::vec_if_else(...)
 25. └─rlang::abort(message = message, call = call)
Execution halted
Running examples in ‘delimtools-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: match_ratio
> ### Title: Compute Agreement Between Alternative Species Delimitation
> ###   Partitions
> ### Aliases: match_ratio
> 
> ### ** Examples
> 
> 
> # estimate match ratio statistics
> match_ratio(geophagus_delims)
Error in `purrr::map()`:
ℹ In index: 1.
Caused by error in `dplyr::mutate()`:
ℹ In argument: `n_match = dplyr::if_else(dplyr::pick(2) ==
  dplyr::pick(3), union, 0)`.
Caused by error in `dplyr::if_else()`:
! `condition` must be a logical vector, not a logical matrix.
Backtrace:
     ▆
  1. ├─delimtools::match_ratio(geophagus_delims)
  2. │ ├─dplyr::ungroup(...)
  3. │ ├─dplyr::arrange(...)
  4. │ ├─dplyr::group_by(...)
  5. │ ├─purrr::list_rbind(...)
  6. │ │ └─purrr:::check_list_of_data_frames(x)
  7. │ │   └─vctrs::obj_check_list(x, call = error_call)
  8. │ ├─rlang::set_names(...)
  9. │ └─purrr::map(...)
 10. │   └─purrr:::map_("list", .x, .f, ..., .progress = .progress)
 11. │     ├─purrr:::with_indexed_errors(...)
 12. │     │ └─base::withCallingHandlers(...)
 13. │     ├─purrr:::call_with_cleanup(...)
 14. │     └─delimtools (local) .f(.x[[i]], ...)
 15. │       ├─dplyr::summarise(...)
 16. │       ├─dplyr::mutate(...)
 17. │       └─dplyr:::mutate.data.frame(...)
 18. │         └─dplyr:::mutate_cols(.data, dplyr_quosures(...), by)
 19. │           ├─base::withCallingHandlers(...)
 20. │           └─dplyr:::mutate_col(dots[[i]], data, mask, new_columns)
 21. │             └─mask$eval_all_mutate(quo)
 22. │               └─dplyr (local) eval()
 23. ├─dplyr::if_else(...)
 24. │ └─vctrs::vec_if_else(...)
 25. └─rlang::abort(message = message, call = call)
Execution halted
Running examples in ‘delimtools-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: match_ratio
> ### Title: Compute Agreement Between Alternative Species Delimitation
> ###   Partitions
> ### Aliases: match_ratio
> 
> ### ** Examples
> 
> 
> # estimate match ratio statistics
> match_ratio(geophagus_delims)
Error in `purrr::map()`:
ℹ In index: 1.
Caused by error in `dplyr::mutate()`:
ℹ In argument: `n_match = dplyr::if_else(dplyr::pick(2) ==
  dplyr::pick(3), union, 0)`.
Caused by error in `dplyr::if_else()`:
! `condition` must be a logical vector, not a logical matrix.
Backtrace:
     ▆
  1. ├─delimtools::match_ratio(geophagus_delims)
  2. │ ├─dplyr::ungroup(...)
  3. │ ├─dplyr::arrange(...)
  4. │ ├─dplyr::group_by(...)
  5. │ ├─purrr::list_rbind(...)
  6. │ │ └─purrr:::check_list_of_data_frames(x)
  7. │ │   └─vctrs::obj_check_list(x, call = error_call)
  8. │ ├─rlang::set_names(...)
  9. │ └─purrr::map(...)
 10. │   └─purrr:::map_("list", .x, .f, ..., .progress = .progress)
 11. │     ├─purrr:::with_indexed_errors(...)
 12. │     │ └─base::withCallingHandlers(...)
 13. │     ├─purrr:::call_with_cleanup(...)
 14. │     └─delimtools (local) .f(.x[[i]], ...)
 15. │       ├─dplyr::summarise(...)
 16. │       ├─dplyr::mutate(...)
 17. │       └─dplyr:::mutate.data.frame(...)
 18. │         └─dplyr:::mutate_cols(.data, dplyr_quosures(...), by)
 19. │           ├─base::withCallingHandlers(...)
 20. │           └─dplyr:::mutate_col(dots[[i]], data, mask, new_columns)
 21. │             └─mask$eval_all_mutate(quo)
 22. │               └─dplyr (local) eval()
 23. ├─dplyr::if_else(...)
 24. │ └─vctrs::vec_if_else(...)
 25. └─rlang::abort(message = message, call = call)
Execution halted
Package unavailable to check Rd xrefs: ‘bGMYC’
Unknown package ‘splits’ in Rd xrefs
Package unavailable to check Rd xrefs: ‘bGMYC’
Unknown package ‘splits’ in Rd xrefs
Running examples in 'delimtools-Ex.R' failed
The error most likely occurred in:

> ### Name: match_ratio
> ### Title: Compute Agreement Between Alternative Species Delimitation
> ###   Partitions
> ### Aliases: match_ratio
> 
> ### ** Examples
> 
> 
> # estimate match ratio statistics
> match_ratio(geophagus_delims)
Error in `purrr::map()`:
ℹ In index: 1.
Caused by error in `dplyr::mutate()`:
ℹ In argument: `n_match = dplyr::if_else(dplyr::pick(2) ==
  dplyr::pick(3), union, 0)`.
Caused by error in `dplyr::if_else()`:
! `condition` must be a logical vector, not a logical matrix.
Backtrace:
     ▆
  1. ├─delimtools::match_ratio(geophagus_delims)
  2. │ ├─dplyr::ungroup(...)
  3. │ ├─dplyr::arrange(...)
  4. │ ├─dplyr::group_by(...)
  5. │ ├─purrr::list_rbind(...)
  6. │ │ └─purrr:::check_list_of_data_frames(x)
  7. │ │   └─vctrs::obj_check_list(x, call = error_call)
  8. │ ├─rlang::set_names(...)
  9. │ └─purrr::map(...)
 10. │   └─purrr:::map_("list", .x, .f, ..., .progress = .progress)
 11. │     ├─purrr:::with_indexed_errors(...)
 12. │     │ └─base::withCallingHandlers(...)
 13. │     ├─purrr:::call_with_cleanup(...)
 14. │     └─delimtools (local) .f(.x[[i]], ...)
 15. │       ├─dplyr::summarise(...)
 16. │       ├─dplyr::mutate(...)
 17. │       └─dplyr:::mutate.data.frame(...)
 18. │         └─dplyr:::mutate_cols(.data, dplyr_quosures(...), by)
 19. │           ├─base::withCallingHandlers(...)
 20. │           └─dplyr:::mutate_col(dots[[i]], data, mask, new_columns)
 21. │             └─mask$eval_all_mutate(quo)
 22. │               └─dplyr (local) eval()
 23. ├─dplyr::if_else(...)
 24. │ └─vctrs::vec_if_else(...)
 25. └─rlang::abort(message = message, call = call)
Execution halted
Packages suggested but not available for checking: 'bGMYC', 'splits'
Packages unavailable to check Rd xrefs: ‘bGMYC’, ‘splits’
Packages suggested but not available for checking: 'bGMYC', 'splits'
Package unavailable to check Rd xrefs: ‘bGMYC’
Unknown package ‘splits’ in Rd xrefs
Packages suggested but not available for checking: 'bGMYC', 'splits'
Packages unavailable to check Rd xrefs: 'bGMYC', 'splits'
Running examples in 'delimtools-Ex.R' failed
The error most likely occurred in:

> ### Name: match_ratio
> ### Title: Compute Agreement Between Alternative Species Delimitation
> ###   Partitions
> ### Aliases: match_ratio
> 
> ### ** Examples
> 
> 
> # estimate match ratio statistics
> match_ratio(geophagus_delims)
Error in `purrr::map()`:
ℹ In index: 1.
Caused by error in `dplyr::mutate()`:
ℹ In argument: `n_match = dplyr::if_else(dplyr::pick(2) ==
  dplyr::pick(3), union, 0)`.
Caused by error in `dplyr::if_else()`:
! `condition` must be a logical vector, not a logical matrix.
Backtrace:
     ▆
  1. ├─delimtools::match_ratio(geophagus_delims)
  2. │ ├─dplyr::ungroup(...)
  3. │ ├─dplyr::arrange(...)
  4. │ ├─dplyr::group_by(...)
  5. │ ├─purrr::list_rbind(...)
  6. │ │ └─purrr:::check_list_of_data_frames(x)
  7. │ │   └─vctrs::obj_check_list(x, call = error_call)
  8. │ ├─rlang::set_names(...)
  9. │ └─purrr::map(...)
 10. │   └─purrr:::map_("list", .x, .f, ..., .progress = .progress)
 11. │     ├─purrr:::with_indexed_errors(...)
 12. │     │ └─base::withCallingHandlers(...)
 13. │     ├─purrr:::call_with_cleanup(...)
 14. │     └─delimtools (local) .f(.x[[i]], ...)
 15. │       ├─dplyr::summarise(...)
 16. │       ├─dplyr::mutate(...)
 17. │       └─dplyr:::mutate.data.frame(...)
 18. │         └─dplyr:::mutate_cols(.data, dplyr_quosures(...), by)
 19. │           ├─base::withCallingHandlers(...)
 20. │           └─dplyr:::mutate_col(dots[[i]], data, mask, new_columns)
 21. │             └─mask$eval_all_mutate(quo)
 22. │               └─dplyr (local) eval()
 23. ├─dplyr::if_else(...)
 24. │ └─vctrs::vec_if_else(...)
 25. └─rlang::abort(message = message, call = call)
Execution halted